Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.34■■□□□ 1.01
SUPT3HO75486 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.34■■□□□ 1.01
SUPT3HO75486 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SUPT3HO75486 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SUPT3HO75486 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SUPT3HO75486 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.34■■□□□ 1.01
SUPT3HO75486 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
SUPT3HO75486 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SUPT3HO75486 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.34■■□□□ 1.01
SUPT3HO75486 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SUPT3HO75486 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SUPT3HO75486 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SUPT3HO75486 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SUPT3HO75486 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SUPT3HO75486 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.33■■□□□ 1.01
SUPT3HO75486 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.33■■□□□ 1.01
SUPT3HO75486 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.33■■□□□ 1.01
SUPT3HO75486 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SUPT3HO75486 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SUPT3HO75486 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SUPT3HO75486 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SUPT3HO75486 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SUPT3HO75486 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SUPT3HO75486 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.32■■□□□ 1
SUPT3HO75486 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 AL356441.2-201ENST00000443009 864 ntBASIC21.32■■□□□ 1
SUPT3HO75486 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.32■■□□□ 1
SUPT3HO75486 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.32■■□□□ 1
SUPT3HO75486 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SUPT3HO75486 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SUPT3HO75486 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.31■■□□□ 1
SUPT3HO75486 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SUPT3HO75486 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.31■■□□□ 1
SUPT3HO75486 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SUPT3HO75486 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.31■■□□□ 1
SUPT3HO75486 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SUPT3HO75486 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.3■■□□□ 1
SUPT3HO75486 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SUPT3HO75486 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SUPT3HO75486 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SUPT3HO75486 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.3■■□□□ 1
SUPT3HO75486 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.3■■□□□ 1
SUPT3HO75486 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.3■■□□□ 1
SUPT3HO75486 MIR3181-201ENST00000578512 73 ntBASIC21.3■■□□□ 1
SUPT3HO75486 AL512631.2-201ENST00000604634 923 ntBASIC21.3■■□□□ 1
SUPT3HO75486 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.3■■□□□ 1
SUPT3HO75486 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.3■■□□□ 1
SUPT3HO75486 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SUPT3HO75486 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SUPT3HO75486 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SUPT3HO75486 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.29■■□□□ 1
SUPT3HO75486 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SUPT3HO75486 AC007375.3-201ENST00000600936 2314 ntBASIC21.29■■□□□ 1
SUPT3HO75486 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.29■■□□□ 1
SUPT3HO75486 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.28■■□□□ 1
SUPT3HO75486 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SUPT3HO75486 AC092171.4-201ENST00000609130 632 ntBASIC21.28■■□□□ 1
SUPT3HO75486 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 AL031602.1-201ENST00000633169 911 ntBASIC21.28■■□□□ 1
SUPT3HO75486 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.28■■□□□ 1
SUPT3HO75486 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.28■■□□□ 1
SUPT3HO75486 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SUPT3HO75486 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SUPT3HO75486 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.27■■□□□ 1
SUPT3HO75486 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
SUPT3HO75486 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SUPT3HO75486 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms