Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM13O60858 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM13O60858 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM13O60858 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM13O60858 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM13O60858 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM13O60858 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM13O60858 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM13O60858 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM13O60858 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM13O60858 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRIM13O60858 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
TRIM13O60858 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM13O60858 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM13O60858 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM13O60858 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TRIM13O60858 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
TRIM13O60858 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM13O60858 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM13O60858 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM13O60858 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 AC079089.2-201ENST00000531211 1277 ntBASIC21.21■□□□□ 0.99
TRIM13O60858 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 AL031602.1-201ENST00000633169 911 ntBASIC21.21■□□□□ 0.99
TRIM13O60858 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM13O60858 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.2■□□□□ 0.99
TRIM13O60858 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM13O60858 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM13O60858 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM13O60858 FEM1AP4-201ENST00000443167 1987 ntBASIC21.19■□□□□ 0.98
TRIM13O60858 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM13O60858 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM13O60858 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM13O60858 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM13O60858 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM13O60858 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
TRIM13O60858 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM13O60858 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM13O60858 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM13O60858 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM13O60858 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
TRIM13O60858 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM13O60858 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM13O60858 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM13O60858 TSPY9P-201ENST00000440215 945 ntBASIC21.18■□□□□ 0.98
TRIM13O60858 TSPY11P-201ENST00000442607 1045 ntBASIC21.18■□□□□ 0.98
TRIM13O60858 AC239859.2-201ENST00000444165 318 ntBASIC21.18■□□□□ 0.98
TRIM13O60858 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM13O60858 AL117332.1-201ENST00000622628 974 ntBASIC21.18■□□□□ 0.98
TRIM13O60858 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRIM13O60858 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM13O60858 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms