Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.3■■□□□ 1.16
TSPAN3O60637 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.3■■□□□ 1.16
TSPAN3O60637 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.3■■□□□ 1.16
TSPAN3O60637 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
TSPAN3O60637 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TSPAN3O60637 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TSPAN3O60637 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
TSPAN3O60637 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TSPAN3O60637 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TSPAN3O60637 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TSPAN3O60637 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.29■■□□□ 1.16
TSPAN3O60637 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.29■■□□□ 1.16
TSPAN3O60637 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.29■■□□□ 1.16
TSPAN3O60637 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TSPAN3O60637 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.29■■□□□ 1.16
TSPAN3O60637 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.29■■□□□ 1.16
TSPAN3O60637 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.29■■□□□ 1.16
TSPAN3O60637 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.29■■□□□ 1.16
TSPAN3O60637 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.29■■□□□ 1.16
TSPAN3O60637 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TSPAN3O60637 C1orf229-201ENST00000623686 2258 ntBASIC22.29■■□□□ 1.16
TSPAN3O60637 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TSPAN3O60637 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.28■■□□□ 1.16
TSPAN3O60637 AC022517.1-201ENST00000592429 346 ntBASIC22.28■■□□□ 1.16
TSPAN3O60637 IKBKGP1-201ENST00000612193 1073 ntBASIC22.28■■□□□ 1.16
TSPAN3O60637 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TSPAN3O60637 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.28■■□□□ 1.16
TSPAN3O60637 LINC00526-201ENST00000581067 1875 ntBASIC22.28■■□□□ 1.16
TSPAN3O60637 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TSPAN3O60637 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TSPAN3O60637 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TSPAN3O60637 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TSPAN3O60637 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.27■■□□□ 1.16
TSPAN3O60637 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.27■■□□□ 1.16
TSPAN3O60637 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.27■■□□□ 1.16
TSPAN3O60637 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TSPAN3O60637 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TSPAN3O60637 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.26■■□□□ 1.15
TSPAN3O60637 AC137767.1-201ENST00000602918 1920 ntBASIC22.26■■□□□ 1.15
TSPAN3O60637 OR7E47P-201ENST00000546390 1422 ntBASIC22.26■■□□□ 1.15
TSPAN3O60637 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.26■■□□□ 1.15
TSPAN3O60637 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.26■■□□□ 1.15
TSPAN3O60637 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TSPAN3O60637 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TSPAN3O60637 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TSPAN3O60637 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
TSPAN3O60637 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TSPAN3O60637 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.25■■□□□ 1.15
TSPAN3O60637 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.25■■□□□ 1.15
TSPAN3O60637 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TSPAN3O60637 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TSPAN3O60637 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TSPAN3O60637 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.25■■□□□ 1.15
TSPAN3O60637 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.25■■□□□ 1.15
TSPAN3O60637 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TSPAN3O60637 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TSPAN3O60637 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TSPAN3O60637 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.24■■□□□ 1.15
TSPAN3O60637 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.24■■□□□ 1.15
TSPAN3O60637 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.24■■□□□ 1.15
TSPAN3O60637 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TSPAN3O60637 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.24■■□□□ 1.15
TSPAN3O60637 KRT18P61-201ENST00000585825 1298 ntBASIC22.24■■□□□ 1.15
TSPAN3O60637 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.24■■□□□ 1.15
TSPAN3O60637 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TSPAN3O60637 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TSPAN3O60637 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TSPAN3O60637 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TSPAN3O60637 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TSPAN3O60637 AP004607.7-201ENST00000527152 1677 ntBASIC22.23■■□□□ 1.15
TSPAN3O60637 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TSPAN3O60637 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TSPAN3O60637 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.23■■□□□ 1.15
TSPAN3O60637 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TSPAN3O60637 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TSPAN3O60637 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.23■■□□□ 1.15
TSPAN3O60637 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.23■■□□□ 1.15
TSPAN3O60637 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TSPAN3O60637 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TSPAN3O60637 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TSPAN3O60637 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.22■■□□□ 1.15
TSPAN3O60637 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TSPAN3O60637 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TSPAN3O60637 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSPAN3O60637 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.22■■□□□ 1.15
TSPAN3O60637 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.22■■□□□ 1.15
TSPAN3O60637 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms