Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GUSBP5-201ENST00000418136 578 ntBASIC20.47■□□□□ 0.87
PDLIM1O00151 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM1O00151 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM1O00151 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM1O00151 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM1O00151 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM1O00151 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
PDLIM1O00151 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM1O00151 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM1O00151 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.46■□□□□ 0.87
PDLIM1O00151 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.46■□□□□ 0.87
PDLIM1O00151 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM1O00151 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
PDLIM1O00151 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM1O00151 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM1O00151 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
PDLIM1O00151 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.45■□□□□ 0.86
PDLIM1O00151 AL157384.1-201ENST00000445995 2473 ntBASIC20.45■□□□□ 0.86
PDLIM1O00151 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDLIM1O00151 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM1O00151 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM1O00151 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.45■□□□□ 0.86
PDLIM1O00151 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM1O00151 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM1O00151 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM1O00151 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM1O00151 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM1O00151 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM1O00151 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM1O00151 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM1O00151 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDLIM1O00151 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PDLIM1O00151 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM1O00151 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 KRT125P-201ENST00000546827 989 ntBASIC20.44■□□□□ 0.86
PDLIM1O00151 MIR4787-201ENST00000607364 84 ntBASIC20.44■□□□□ 0.86
PDLIM1O00151 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.44■□□□□ 0.86
PDLIM1O00151 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.44■□□□□ 0.86
PDLIM1O00151 LINC01521-201ENST00000504184 1943 ntBASIC20.44■□□□□ 0.86
PDLIM1O00151 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM1O00151 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM1O00151 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM1O00151 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.43■□□□□ 0.86
PDLIM1O00151 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM1O00151 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
PDLIM1O00151 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM1O00151 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM1O00151 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM1O00151 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.43■□□□□ 0.86
PDLIM1O00151 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.43■□□□□ 0.86
PDLIM1O00151 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PDLIM1O00151 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
PDLIM1O00151 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.42■□□□□ 0.86
PDLIM1O00151 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM1O00151 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PDLIM1O00151 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM1O00151 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.42■□□□□ 0.86
PDLIM1O00151 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.42■□□□□ 0.86
PDLIM1O00151 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.42■□□□□ 0.86
PDLIM1O00151 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM1O00151 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDLIM1O00151 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM1O00151 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM1O00151 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDLIM1O00151 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDLIM1O00151 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM1O00151 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM1O00151 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.41■□□□□ 0.86
PDLIM1O00151 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM1O00151 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDLIM1O00151 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM1O00151 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PDLIM1O00151 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM1O00151 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms