Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TVP23AA6NH52 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TVP23AA6NH52 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TVP23AA6NH52 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.25■□□□□ 0.67
TVP23AA6NH52 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.25■□□□□ 0.67
TVP23AA6NH52 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TVP23AA6NH52 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TVP23AA6NH52 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TVP23AA6NH52 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TVP23AA6NH52 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TVP23AA6NH52 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TVP23AA6NH52 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TVP23AA6NH52 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TVP23AA6NH52 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
TVP23AA6NH52 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TVP23AA6NH52 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TVP23AA6NH52 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TVP23AA6NH52 MIR3621-201ENST00000580529 85 ntBASIC19.23■□□□□ 0.67
TVP23AA6NH52 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 AC026310.3-201ENST00000625186 2373 ntBASIC19.23■□□□□ 0.67
TVP23AA6NH52 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TVP23AA6NH52 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TVP23AA6NH52 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TVP23AA6NH52 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TVP23AA6NH52 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TVP23AA6NH52 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.22■□□□□ 0.67
TVP23AA6NH52 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 AL031602.1-201ENST00000633169 911 ntBASIC19.22■□□□□ 0.67
TVP23AA6NH52 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TVP23AA6NH52 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.21■□□□□ 0.67
TVP23AA6NH52 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.21■□□□□ 0.67
TVP23AA6NH52 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.21■□□□□ 0.67
TVP23AA6NH52 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.21■□□□□ 0.67
TVP23AA6NH52 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.21■□□□□ 0.67
TVP23AA6NH52 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TVP23AA6NH52 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TVP23AA6NH52 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TVP23AA6NH52 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TVP23AA6NH52 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TVP23AA6NH52 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TVP23AA6NH52 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 MIR3181-201ENST00000578512 73 ntBASIC19.2■□□□□ 0.66
TVP23AA6NH52 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.2■□□□□ 0.66
TVP23AA6NH52 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms