Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 AC087742.1-201ENST00000575880 1738 ntBASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.3■■■□□ 2.6
CCDC144AA2RUR9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC144AA2RUR9 KRT18P11-201ENST00000435214 1283 ntBASIC31.29■■■□□ 2.6
CCDC144AA2RUR9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.29■■■□□ 2.6
CCDC144AA2RUR9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.29■■■□□ 2.6
CCDC144AA2RUR9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC144AA2RUR9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.27■■■□□ 2.6
CCDC144AA2RUR9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC144AA2RUR9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC144AA2RUR9 AL034346.1-201ENST00000568244 1277 ntBASIC31.26■■■□□ 2.6
CCDC144AA2RUR9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC144AA2RUR9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC144AA2RUR9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC144AA2RUR9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 AC137767.1-201ENST00000602918 1920 ntBASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 MFSD11-216ENST00000590393 1141 ntBASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC144AA2RUR9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.24■■■□□ 2.59
CCDC144AA2RUR9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 AP006587.3-201ENST00000525742 1516 ntBASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCDC144AA2RUR9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 AC026185.1-201ENST00000445748 174 ntBASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 UBE2DNL-204ENST00000602536 740 ntBASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 AC011767.1-201ENST00000617410 1153 ntBASIC31.22■■■□□ 2.59
CCDC144AA2RUR9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 HLA-L-209ENST00000420110 1011 ntBASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC144AA2RUR9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC144AA2RUR9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC144AA2RUR9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
CCDC144AA2RUR9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
CCDC144AA2RUR9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CCDC144AA2RUR9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
CCDC144AA2RUR9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC144AA2RUR9 CROCCP5-201ENST00000436658 830 ntBASIC31.19■■■□□ 2.58
CCDC144AA2RUR9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC144AA2RUR9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.19■■■□□ 2.58
CCDC144AA2RUR9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC144AA2RUR9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC144AA2RUR9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms