Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC196A0A1B0GTZ2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.17■■□□□ 1.62
CCDC196A0A1B0GTZ2 EP400NL-214ENST00000641289 2402 ntBASIC25.17■■□□□ 1.62
CCDC196A0A1B0GTZ2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC196A0A1B0GTZ2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC196A0A1B0GTZ2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CCDC196A0A1B0GTZ2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CCDC196A0A1B0GTZ2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 MIR572-201ENST00000384983 95 ntBASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC196A0A1B0GTZ2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
CCDC196A0A1B0GTZ2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.14■■□□□ 1.62
CCDC196A0A1B0GTZ2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC196A0A1B0GTZ2 SMUG1P1-201ENST00000590640 811 ntBASIC25.14■■□□□ 1.62
CCDC196A0A1B0GTZ2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC196A0A1B0GTZ2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC196A0A1B0GTZ2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC196A0A1B0GTZ2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC196A0A1B0GTZ2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.14■■□□□ 1.61
CCDC196A0A1B0GTZ2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC196A0A1B0GTZ2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 AL034346.1-201ENST00000568244 1277 ntBASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCDC196A0A1B0GTZ2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC196A0A1B0GTZ2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 AC105233.4-201ENST00000642045 216 ntBASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 C11orf96-202ENST00000528572 1834 ntBASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
CCDC196A0A1B0GTZ2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CCDC196A0A1B0GTZ2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 AC105265.2-201ENST00000467189 838 ntBASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
CCDC196A0A1B0GTZ2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms