Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 C17orf82-201ENST00000623772 1530 ntBASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF103-CHMP3A0A140T963 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF103-CHMP3A0A140T963 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 MIR6724-1-201ENST00000616420 92 ntBASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 MIR6724-2-201ENST00000616483 92 ntBASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 MIR6724-4-201ENST00000617390 92 ntBASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 MIR6724-3-201ENST00000622482 92 ntBASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF103-CHMP3A0A140T963 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 LINC01960-201ENST00000563759 1884 ntBASIC20.69■□□□□ 0.9
RNF103-CHMP3A0A140T963 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF103-CHMP3A0A140T963 AC004687.1-201ENST00000579003 1625 ntBASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 KRT16P3-201ENST00000439127 1283 ntBASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RNF103-CHMP3A0A140T963 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 AL035685.1-201ENST00000636663 812 ntBASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF103-CHMP3A0A140T963 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms