Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	HIS4	YCL030C	2400 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	YDL109C	YDL109C	1944 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	TGL4	YKR089C	2733 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	CLF1	YLR117C	2064 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	RRP4	YHR069C	1080 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	YIL068W-A	YIL068W-A	384 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	YIL177W-A	YIL177W-A	483 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	YJL225W-A	YJL225W-A	483 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	YMR052C-A	YMR052C-A	366 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	NAT3	YPR131C	588 nt		5.4	□□□□□ -1.54
TY4B-P	A0A0B7P3V8	TDA7	YNL176C	1911 nt		5.4	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SBE2	YDR351W	2595 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	AIM7	YDR063W	450 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	GIR2	YDR152W	798 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	VAB2	YEL005C	849 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YER187W	YER187W	426 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TPM2	YIL138C	486 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YKL083W	YKL083W	615 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	IMP2	YMR035W	534 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	IMP1	YMR150C	573 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	HFA1	YMR207C	6372 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	GPI15	YNL038W	690 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ERV15	YBR210W	429 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SRB6	YBR253W	366 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	GZF3	YJL110C	1656 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ORC6	YHR118C	1308 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	BOP2	YLR267W	1713 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	CDC40	YDR364C	1368 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SYG1	YIL047C	2709 nt		5.39	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YML020W	YML020W	1995 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	UGA3	YDL170W	1587 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ECM32	YER176W	3366 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	MEF2	YJL102W	2460 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	PDI1	YCL043C	1569 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YDR131C	YDR131C	1671 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TSC13	YDL015C	933 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	GUK1	YDR454C	564 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ASK1	YKL052C	879 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ECM19	YLR390W	339 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	LST8	YNL006W	912 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SOL1	YNR034W	966 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YPL038W-A	YPL038W-A	192 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YPL114W	YPL114W	420 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	OPY1	YBR129C	987 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	NUP116	YMR047C	3342 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TPO2	YGR138C	1845 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	LTV1	YKL143W	1392 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TMN2	YDR107C	2019 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SSY5	YJL156C	2100 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	MRK1	YDL079C	1506 nt		5.38	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	CAB3	YKL088W	1716 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SAC1	YKL212W	1872 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YCL076W	YCL076W	744 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	CDC50	YCR094W	1176 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	DFM1	YDR411C	1026 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YGL006W-A	YGL006W-A	111 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YKE4	YIL023C	1041 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YVH1	YIR026C	1095 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	UTP30	YKR060W	825 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YLR126C	YLR126C	756 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SHP1	YBL058W	1272 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	RHO2	YNL090W	579 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YNL109W	YNL109W	546 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TOM22	YNL131W	459 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	RPS15	YOL040C	429 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	NGL1	YOL042W	1092 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SLF1	YDR515W	1344 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ARP4	YJL081C	1470 nt		5.37	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YCL065W	YCL065W	369 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YDR269C	YDR269C	324 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	BIG1	YHR101C	1008 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YHR125W	YHR125W	306 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YMR254C	YMR254C	309 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	MRM1	YOR201C	1239 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	AVT5	YBL089W	1380 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	FRS1	YLR060W	1788 nt		5.36	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	BUL1	YMR275C	2931 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	UGA2	YBR006W	1494 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TFA1	YKL028W	1449 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	DAD1	YDR016C	285 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ATG31	YDR022C	591 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YFL051C	YFL051C	483 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YKL131W	YKL131W	522 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YPT7	YML001W	627 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YNR021W	YNR021W	1215 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	DSS4	YPR017C	432 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	ARL1	YBR164C	552 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SEC66	YBR171W	621 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	IKS1	YJL057C	2004 nt		5.35	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SMF1	YOL122C	1728 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	QDR1	YIL120W	1692 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	CHK1	YBR274W	1584 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	TSL1	YML100W	3297 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	EMP46	YLR080W	1335 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	FIN1	YDR130C	876 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YRA1	YDR381W	681 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	SDC1	YDR469W	528 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	RPL34A	YER056C-A	366 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	EGD2	YHR193C	525 nt		5.34	□□□□□ -1.55
TY4B-P	A0A0B7P3V8	YIL060W	YIL060W	435 nt		5.34	□□□□□ -1.55

Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms