Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Smad6-203ENSMUST00000179458 273 ntBASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm8493-201ENSMUST00000196881 489 ntBASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-7-dv9A0A075B639 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-7-dv9A0A075B639 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-7-dv9A0A075B639 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm43173-201ENSMUST00000202246 593 ntBASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-7-dv9A0A075B639 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6-7-dv9A0A075B639 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.89■□□□□ 0.3
Trav6-7-dv9A0A075B639 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6-7-dv9A0A075B639 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm27454-201ENSMUST00000185090 204 ntBASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-7-dv9A0A075B639 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm27801-201ENSMUST00000184174 223 ntBASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms