Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RpgrQ9R0X5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RpgrQ9R0X5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RpgrQ9R0X5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RpgrQ9R0X5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RpgrQ9R0X5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
RpgrQ9R0X5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RpgrQ9R0X5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RpgrQ9R0X5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.14■■□□□ 1.61
RpgrQ9R0X5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RpgrQ9R0X5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.13■■□□□ 1.61
RpgrQ9R0X5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RpgrQ9R0X5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RpgrQ9R0X5 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.1■■□□□ 1.61
RpgrQ9R0X5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RpgrQ9R0X5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RpgrQ9R0X5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RpgrQ9R0X5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RpgrQ9R0X5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RpgrQ9R0X5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RpgrQ9R0X5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.06■■□□□ 1.6
RpgrQ9R0X5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
RpgrQ9R0X5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RpgrQ9R0X5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RpgrQ9R0X5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RpgrQ9R0X5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.02■■□□□ 1.6
RpgrQ9R0X5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
RpgrQ9R0X5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RpgrQ9R0X5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RpgrQ9R0X5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25■■□□□ 1.59
RpgrQ9R0X5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RpgrQ9R0X5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.99■■□□□ 1.59
RpgrQ9R0X5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RpgrQ9R0X5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RpgrQ9R0X5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RpgrQ9R0X5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RpgrQ9R0X5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RpgrQ9R0X5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
RpgrQ9R0X5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RpgrQ9R0X5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RpgrQ9R0X5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
RpgrQ9R0X5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RpgrQ9R0X5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RpgrQ9R0X5 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.94■■□□□ 1.58
RpgrQ9R0X5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
RpgrQ9R0X5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RpgrQ9R0X5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RpgrQ9R0X5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RpgrQ9R0X5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.9■■□□□ 1.58
RpgrQ9R0X5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RpgrQ9R0X5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RpgrQ9R0X5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
RpgrQ9R0X5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RpgrQ9R0X5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RpgrQ9R0X5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RpgrQ9R0X5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RpgrQ9R0X5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.84■■□□□ 1.57
RpgrQ9R0X5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RpgrQ9R0X5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RpgrQ9R0X5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.83■■□□□ 1.57
RpgrQ9R0X5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RpgrQ9R0X5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RpgrQ9R0X5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
RpgrQ9R0X5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RpgrQ9R0X5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RpgrQ9R0X5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RpgrQ9R0X5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RpgrQ9R0X5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RpgrQ9R0X5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RpgrQ9R0X5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RpgrQ9R0X5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RpgrQ9R0X5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RpgrQ9R0X5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RpgrQ9R0X5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.77■■□□□ 1.56
RpgrQ9R0X5 Zfp131-205ENSMUST00000223812 663 ntBASIC24.77■■□□□ 1.56
RpgrQ9R0X5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RpgrQ9R0X5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RpgrQ9R0X5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
RpgrQ9R0X5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
RpgrQ9R0X5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RpgrQ9R0X5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
RpgrQ9R0X5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RpgrQ9R0X5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RpgrQ9R0X5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RpgrQ9R0X5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RpgrQ9R0X5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RpgrQ9R0X5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.55
RpgrQ9R0X5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RpgrQ9R0X5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RpgrQ9R0X5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RpgrQ9R0X5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RpgrQ9R0X5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.68■■□□□ 1.54
RpgrQ9R0X5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.68■■□□□ 1.54
RpgrQ9R0X5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
RpgrQ9R0X5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RpgrQ9R0X5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RpgrQ9R0X5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RpgrQ9R0X5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RpgrQ9R0X5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RpgrQ9R0X5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms