Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Crlf1Q9JM58 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21■□□□□ 0.95
Crlf1Q9JM58 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Crlf1Q9JM58 Gm43863-201ENSMUST00000203822 1192 ntBASIC21■□□□□ 0.95
Crlf1Q9JM58 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf1Q9JM58 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Crlf1Q9JM58 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf1Q9JM58 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf1Q9JM58 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf1Q9JM58 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.94■□□□□ 0.94
Crlf1Q9JM58 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.93■□□□□ 0.94
Crlf1Q9JM58 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Crlf1Q9JM58 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crlf1Q9JM58 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.9■□□□□ 0.94
Crlf1Q9JM58 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Crlf1Q9JM58 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Crlf1Q9JM58 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Crlf1Q9JM58 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Crlf1Q9JM58 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.88■□□□□ 0.93
Crlf1Q9JM58 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.88■□□□□ 0.93
Crlf1Q9JM58 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Crlf1Q9JM58 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Crlf1Q9JM58 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Crlf1Q9JM58 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf1Q9JM58 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf1Q9JM58 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf1Q9JM58 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crlf1Q9JM58 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.83■□□□□ 0.93
Crlf1Q9JM58 Gm7432-201ENSMUST00000210343 879 ntBASIC20.83■□□□□ 0.93
Crlf1Q9JM58 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Crlf1Q9JM58 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf1Q9JM58 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Crlf1Q9JM58 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.8■□□□□ 0.92
Crlf1Q9JM58 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf1Q9JM58 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf1Q9JM58 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.76■□□□□ 0.91
Crlf1Q9JM58 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Crlf1Q9JM58 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Crlf1Q9JM58 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Crlf1Q9JM58 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.75■□□□□ 0.91
Crlf1Q9JM58 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Crlf1Q9JM58 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf1Q9JM58 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf1Q9JM58 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf1Q9JM58 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf1Q9JM58 Nkain2-201ENSMUST00000092602 558 ntBASIC20.73■□□□□ 0.91
Crlf1Q9JM58 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf1Q9JM58 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf1Q9JM58 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf1Q9JM58 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Crlf1Q9JM58 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Crlf1Q9JM58 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.69■□□□□ 0.9
Crlf1Q9JM58 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf1Q9JM58 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf1Q9JM58 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.67■□□□□ 0.9
Crlf1Q9JM58 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Crlf1Q9JM58 Mir6538-201ENSMUST00000183713 110 ntBASIC20.66■□□□□ 0.9
Crlf1Q9JM58 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Crlf1Q9JM58 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crlf1Q9JM58 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.64■□□□□ 0.89
Crlf1Q9JM58 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Crlf1Q9JM58 Gm11599-201ENSMUST00000118720 878 ntBASIC20.63■□□□□ 0.89
Crlf1Q9JM58 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf1Q9JM58 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Crlf1Q9JM58 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Crlf1Q9JM58 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Crlf1Q9JM58 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Crlf1Q9JM58 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Crlf1Q9JM58 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Crlf1Q9JM58 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Crlf1Q9JM58 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.6■□□□□ 0.89
Crlf1Q9JM58 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crlf1Q9JM58 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Crlf1Q9JM58 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Crlf1Q9JM58 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Crlf1Q9JM58 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Crlf1Q9JM58 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Crlf1Q9JM58 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.57■□□□□ 0.88
Crlf1Q9JM58 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.57■□□□□ 0.88
Crlf1Q9JM58 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Crlf1Q9JM58 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Crlf1Q9JM58 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.55■□□□□ 0.88
Crlf1Q9JM58 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Crlf1Q9JM58 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Crlf1Q9JM58 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Crlf1Q9JM58 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Crlf1Q9JM58 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Crlf1Q9JM58 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Crlf1Q9JM58 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Crlf1Q9JM58 Gm11175-201ENSMUST00000116172 543 ntBASIC20.5■□□□□ 0.87
Crlf1Q9JM58 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Crlf1Q9JM58 Cap2-205ENSMUST00000225824 1634 ntBASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Crlf1Q9JM58 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Crlf1Q9JM58 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms