Protein–RNA interactions for Protein: Q9ER63

Tnfrsf23, Tumor necrosis factor receptor superfamily member 23, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf23Q9ER63 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf23Q9ER63 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf23Q9ER63 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf23Q9ER63 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf23Q9ER63 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf23Q9ER63 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf23Q9ER63 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf23Q9ER63 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf23Q9ER63 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.85■□□□□ 0.61
Tnfrsf23Q9ER63 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf23Q9ER63 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Tnfrsf23Q9ER63 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf23Q9ER63 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.83■□□□□ 0.6
Tnfrsf23Q9ER63 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf23Q9ER63 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf23Q9ER63 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf23Q9ER63 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Tnfrsf23Q9ER63 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.78■□□□□ 0.6
Tnfrsf23Q9ER63 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf23Q9ER63 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf23Q9ER63 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf23Q9ER63 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf23Q9ER63 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf23Q9ER63 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf23Q9ER63 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf23Q9ER63 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf23Q9ER63 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf23Q9ER63 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf23Q9ER63 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf23Q9ER63 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf23Q9ER63 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf23Q9ER63 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf23Q9ER63 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf23Q9ER63 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf23Q9ER63 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf23Q9ER63 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tnfrsf23Q9ER63 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf23Q9ER63 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tnfrsf23Q9ER63 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tnfrsf23Q9ER63 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf23Q9ER63 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf23Q9ER63 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf23Q9ER63 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Tnfrsf23Q9ER63 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf23Q9ER63 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf23Q9ER63 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf23Q9ER63 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf23Q9ER63 Gm45855-201ENSMUST00000212546 880 ntBASIC18.67■□□□□ 0.58
Tnfrsf23Q9ER63 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf23Q9ER63 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf23Q9ER63 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf23Q9ER63 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfrsf23Q9ER63 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.66■□□□□ 0.58
Tnfrsf23Q9ER63 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf23Q9ER63 Gm9397-201ENSMUST00000200125 605 ntBASIC18.65■□□□□ 0.58
Tnfrsf23Q9ER63 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf23Q9ER63 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf23Q9ER63 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.62■□□□□ 0.57
Tnfrsf23Q9ER63 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf23Q9ER63 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf23Q9ER63 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.61■□□□□ 0.57
Tnfrsf23Q9ER63 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf23Q9ER63 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf23Q9ER63 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf23Q9ER63 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf23Q9ER63 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnfrsf23Q9ER63 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.6■□□□□ 0.57
Tnfrsf23Q9ER63 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf23Q9ER63 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf23Q9ER63 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf23Q9ER63 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf23Q9ER63 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf23Q9ER63 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf23Q9ER63 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf23Q9ER63 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf23Q9ER63 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf23Q9ER63 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf23Q9ER63 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf23Q9ER63 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.54■□□□□ 0.56
Tnfrsf23Q9ER63 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf23Q9ER63 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.53■□□□□ 0.56
Tnfrsf23Q9ER63 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf23Q9ER63 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf23Q9ER63 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf23Q9ER63 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf23Q9ER63 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tnfrsf23Q9ER63 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tnfrsf23Q9ER63 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf23Q9ER63 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf23Q9ER63 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf23Q9ER63 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf23Q9ER63 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.49■□□□□ 0.55
Tnfrsf23Q9ER63 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf23Q9ER63 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Tnfrsf23Q9ER63 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf23Q9ER63 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf23Q9ER63 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf23Q9ER63 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Tnfrsf23Q9ER63 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf23Q9ER63 Gm24970-201ENSMUST00000175582 82 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms