Protein–RNA interactions for Protein: Q9D958

Spcs1, Signal peptidase complex subunit 1, mousemouse

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spcs1Q9D958 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Spcs1Q9D958 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spcs1Q9D958 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Spcs1Q9D958 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Spcs1Q9D958 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Spcs1Q9D958 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.53■□□□□ 0.72
Spcs1Q9D958 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Spcs1Q9D958 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Spcs1Q9D958 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Spcs1Q9D958 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Spcs1Q9D958 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Spcs1Q9D958 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Spcs1Q9D958 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.51■□□□□ 0.71
Spcs1Q9D958 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Spcs1Q9D958 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Spcs1Q9D958 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Spcs1Q9D958 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.49■□□□□ 0.71
Spcs1Q9D958 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Spcs1Q9D958 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Spcs1Q9D958 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Spcs1Q9D958 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Spcs1Q9D958 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Spcs1Q9D958 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Spcs1Q9D958 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Spcs1Q9D958 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Spcs1Q9D958 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spcs1Q9D958 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.46■□□□□ 0.71
Spcs1Q9D958 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Spcs1Q9D958 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Spcs1Q9D958 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spcs1Q9D958 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spcs1Q9D958 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Spcs1Q9D958 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spcs1Q9D958 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.43■□□□□ 0.7
Spcs1Q9D958 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.43■□□□□ 0.7
Spcs1Q9D958 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.43■□□□□ 0.7
Spcs1Q9D958 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Spcs1Q9D958 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spcs1Q9D958 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spcs1Q9D958 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Spcs1Q9D958 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spcs1Q9D958 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Spcs1Q9D958 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spcs1Q9D958 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spcs1Q9D958 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Spcs1Q9D958 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spcs1Q9D958 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spcs1Q9D958 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Spcs1Q9D958 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Spcs1Q9D958 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spcs1Q9D958 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Spcs1Q9D958 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Spcs1Q9D958 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spcs1Q9D958 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spcs1Q9D958 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spcs1Q9D958 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Spcs1Q9D958 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spcs1Q9D958 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Spcs1Q9D958 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Spcs1Q9D958 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Spcs1Q9D958 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spcs1Q9D958 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Spcs1Q9D958 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.28■□□□□ 0.68
Spcs1Q9D958 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Spcs1Q9D958 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Spcs1Q9D958 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Spcs1Q9D958 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.27■□□□□ 0.68
Spcs1Q9D958 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Spcs1Q9D958 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Spcs1Q9D958 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Spcs1Q9D958 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Spcs1Q9D958 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Spcs1Q9D958 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Spcs1Q9D958 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Spcs1Q9D958 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Spcs1Q9D958 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.23■□□□□ 0.67
Spcs1Q9D958 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spcs1Q9D958 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spcs1Q9D958 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spcs1Q9D958 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Spcs1Q9D958 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spcs1Q9D958 Gm45855-201ENSMUST00000212546 880 ntBASIC19.21■□□□□ 0.67
Spcs1Q9D958 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.2■□□□□ 0.66
Spcs1Q9D958 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spcs1Q9D958 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Spcs1Q9D958 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spcs1Q9D958 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spcs1Q9D958 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.19■□□□□ 0.66
Spcs1Q9D958 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Spcs1Q9D958 Gm9397-201ENSMUST00000200125 605 ntBASIC19.18■□□□□ 0.66
Spcs1Q9D958 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spcs1Q9D958 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spcs1Q9D958 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spcs1Q9D958 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Spcs1Q9D958 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Spcs1Q9D958 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Spcs1Q9D958 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spcs1Q9D958 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.13■□□□□ 0.65
Spcs1Q9D958 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spcs1Q9D958 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms