Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Taf1dQ9D4V4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
Taf1dQ9D4V4 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.97■■■□□ 2.71
Taf1dQ9D4V4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Taf1dQ9D4V4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Taf1dQ9D4V4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Taf1dQ9D4V4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Taf1dQ9D4V4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Taf1dQ9D4V4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Taf1dQ9D4V4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Taf1dQ9D4V4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.84■■■□□ 2.69
Taf1dQ9D4V4 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.84■■■□□ 2.69
Taf1dQ9D4V4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.82■■■□□ 2.68
Taf1dQ9D4V4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.82■■■□□ 2.68
Taf1dQ9D4V4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.81■■■□□ 2.68
Taf1dQ9D4V4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Taf1dQ9D4V4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Taf1dQ9D4V4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Taf1dQ9D4V4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.78■■■□□ 2.68
Taf1dQ9D4V4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.76■■■□□ 2.67
Taf1dQ9D4V4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Taf1dQ9D4V4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Taf1dQ9D4V4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Taf1dQ9D4V4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Taf1dQ9D4V4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Taf1dQ9D4V4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Taf1dQ9D4V4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Taf1dQ9D4V4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Taf1dQ9D4V4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.66■■■□□ 2.66
Taf1dQ9D4V4 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.66■■■□□ 2.66
Taf1dQ9D4V4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Taf1dQ9D4V4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Taf1dQ9D4V4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.63■■■□□ 2.65
Taf1dQ9D4V4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Taf1dQ9D4V4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Taf1dQ9D4V4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Taf1dQ9D4V4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.6■■■□□ 2.65
Taf1dQ9D4V4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Taf1dQ9D4V4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.58■■■□□ 2.65
Taf1dQ9D4V4 Gm7432-201ENSMUST00000210343 879 ntBASIC31.58■■■□□ 2.65
Taf1dQ9D4V4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Taf1dQ9D4V4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Taf1dQ9D4V4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Taf1dQ9D4V4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Taf1dQ9D4V4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Taf1dQ9D4V4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Taf1dQ9D4V4 Nkain2-201ENSMUST00000092602 558 ntBASIC31.52■■■□□ 2.64
Taf1dQ9D4V4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Taf1dQ9D4V4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.5■■■□□ 2.63
Taf1dQ9D4V4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Taf1dQ9D4V4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
Taf1dQ9D4V4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Taf1dQ9D4V4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
Taf1dQ9D4V4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Taf1dQ9D4V4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
Taf1dQ9D4V4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
Taf1dQ9D4V4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Taf1dQ9D4V4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
Taf1dQ9D4V4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Taf1dQ9D4V4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
Taf1dQ9D4V4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Taf1dQ9D4V4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.42■■■□□ 2.62
Taf1dQ9D4V4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Taf1dQ9D4V4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Taf1dQ9D4V4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.41■■■□□ 2.62
Taf1dQ9D4V4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Taf1dQ9D4V4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Taf1dQ9D4V4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Taf1dQ9D4V4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
Taf1dQ9D4V4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Taf1dQ9D4V4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Taf1dQ9D4V4 Mir6538-201ENSMUST00000183713 110 ntBASIC31.32■■■□□ 2.6
Taf1dQ9D4V4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Taf1dQ9D4V4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Taf1dQ9D4V4 Gm11175-201ENSMUST00000116172 543 ntBASIC31.31■■■□□ 2.6
Taf1dQ9D4V4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Taf1dQ9D4V4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Taf1dQ9D4V4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.31■■■□□ 2.6
Taf1dQ9D4V4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.3■■■□□ 2.6
Taf1dQ9D4V4 Gm11599-201ENSMUST00000118720 878 ntBASIC31.3■■■□□ 2.6
Taf1dQ9D4V4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Taf1dQ9D4V4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
Taf1dQ9D4V4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.28■■■□□ 2.6
Taf1dQ9D4V4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Taf1dQ9D4V4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Taf1dQ9D4V4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Taf1dQ9D4V4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Taf1dQ9D4V4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Taf1dQ9D4V4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
Taf1dQ9D4V4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Taf1dQ9D4V4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Taf1dQ9D4V4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Taf1dQ9D4V4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Taf1dQ9D4V4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Taf1dQ9D4V4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Taf1dQ9D4V4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Taf1dQ9D4V4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Taf1dQ9D4V4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.2■■■□□ 2.59
Taf1dQ9D4V4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Taf1dQ9D4V4 Cap2-205ENSMUST00000225824 1634 ntBASIC31.2■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms