Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rnf8Q8VC56 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf8Q8VC56 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf8Q8VC56 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf8Q8VC56 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf8Q8VC56 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf8Q8VC56 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf8Q8VC56 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Rnf8Q8VC56 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Peli2-204ENSMUST00000226513 1320 ntBASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rnf8Q8VC56 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf8Q8VC56 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf8Q8VC56 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf8Q8VC56 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.91■■□□□ 1.42
Rnf8Q8VC56 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Rnf8Q8VC56 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf8Q8VC56 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf8Q8VC56 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf8Q8VC56 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf8Q8VC56 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.88■■□□□ 1.41
Rnf8Q8VC56 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf8Q8VC56 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf8Q8VC56 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.87■■□□□ 1.41
Rnf8Q8VC56 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.87■■□□□ 1.41
Rnf8Q8VC56 Gm16148-201ENSMUST00000119653 893 ntBASIC23.87■■□□□ 1.41
Rnf8Q8VC56 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf8Q8VC56 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Rnf8Q8VC56 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf8Q8VC56 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf8Q8VC56 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf8Q8VC56 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf8Q8VC56 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Rnf8Q8VC56 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf8Q8VC56 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf8Q8VC56 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf8Q8VC56 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf8Q8VC56 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf8Q8VC56 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf8Q8VC56 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf8Q8VC56 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf8Q8VC56 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf8Q8VC56 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf8Q8VC56 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf8Q8VC56 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf8Q8VC56 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf8Q8VC56 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf8Q8VC56 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf8Q8VC56 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf8Q8VC56 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Rnf8Q8VC56 Zfp131-205ENSMUST00000223812 663 ntBASIC23.66■■□□□ 1.38
Rnf8Q8VC56 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.63■■□□□ 1.37
Rnf8Q8VC56 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.62■■□□□ 1.37
Rnf8Q8VC56 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf8Q8VC56 Amer2-203ENSMUST00000225247 2662 ntBASIC23.61■■□□□ 1.37
Rnf8Q8VC56 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rnf8Q8VC56 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf8Q8VC56 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rnf8Q8VC56 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.57■■□□□ 1.36
Rnf8Q8VC56 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf8Q8VC56 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf8Q8VC56 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf8Q8VC56 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf8Q8VC56 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf8Q8VC56 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Rnf8Q8VC56 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf8Q8VC56 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf8Q8VC56 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf8Q8VC56 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms