Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cdt1Q8R4E9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cdt1Q8R4E9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdt1Q8R4E9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdt1Q8R4E9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdt1Q8R4E9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdt1Q8R4E9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cdt1Q8R4E9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Cdt1Q8R4E9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Cdt1Q8R4E9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cdt1Q8R4E9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cdt1Q8R4E9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdt1Q8R4E9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdt1Q8R4E9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdt1Q8R4E9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cdt1Q8R4E9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdt1Q8R4E9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cdt1Q8R4E9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.36■■□□□ 1.49
Cdt1Q8R4E9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cdt1Q8R4E9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdt1Q8R4E9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdt1Q8R4E9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Cdt1Q8R4E9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.34■■□□□ 1.49
Cdt1Q8R4E9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdt1Q8R4E9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cdt1Q8R4E9 Gm9397-201ENSMUST00000200125 605 ntBASIC24.33■■□□□ 1.49
Cdt1Q8R4E9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cdt1Q8R4E9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
Cdt1Q8R4E9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cdt1Q8R4E9 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.32■■□□□ 1.48
Cdt1Q8R4E9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdt1Q8R4E9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdt1Q8R4E9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdt1Q8R4E9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cdt1Q8R4E9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdt1Q8R4E9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Cdt1Q8R4E9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Cdt1Q8R4E9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cdt1Q8R4E9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.26■■□□□ 1.47
Cdt1Q8R4E9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdt1Q8R4E9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdt1Q8R4E9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.24■■□□□ 1.47
Cdt1Q8R4E9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cdt1Q8R4E9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdt1Q8R4E9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.22■■□□□ 1.47
Cdt1Q8R4E9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdt1Q8R4E9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cdt1Q8R4E9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Cdt1Q8R4E9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cdt1Q8R4E9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.2■■□□□ 1.46
Cdt1Q8R4E9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cdt1Q8R4E9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdt1Q8R4E9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.19■■□□□ 1.46
Cdt1Q8R4E9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cdt1Q8R4E9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdt1Q8R4E9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdt1Q8R4E9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdt1Q8R4E9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Cdt1Q8R4E9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cdt1Q8R4E9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cdt1Q8R4E9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Cdt1Q8R4E9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.16■■□□□ 1.46
Cdt1Q8R4E9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cdt1Q8R4E9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cdt1Q8R4E9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdt1Q8R4E9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdt1Q8R4E9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdt1Q8R4E9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdt1Q8R4E9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.13■■□□□ 1.45
Cdt1Q8R4E9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdt1Q8R4E9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cdt1Q8R4E9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.11■■□□□ 1.45
Cdt1Q8R4E9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Cdt1Q8R4E9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cdt1Q8R4E9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.1■■□□□ 1.45
Cdt1Q8R4E9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cdt1Q8R4E9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.1■■□□□ 1.45
Cdt1Q8R4E9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Cdt1Q8R4E9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cdt1Q8R4E9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.09■■□□□ 1.45
Cdt1Q8R4E9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Cdt1Q8R4E9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cdt1Q8R4E9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.07■■□□□ 1.44
Cdt1Q8R4E9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cdt1Q8R4E9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Cdt1Q8R4E9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.04■■□□□ 1.44
Cdt1Q8R4E9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cdt1Q8R4E9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
Cdt1Q8R4E9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cdt1Q8R4E9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cdt1Q8R4E9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.99■■□□□ 1.43
Cdt1Q8R4E9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.99■■□□□ 1.43
Cdt1Q8R4E9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdt1Q8R4E9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cdt1Q8R4E9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Cdt1Q8R4E9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.98■■□□□ 1.43
Cdt1Q8R4E9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cdt1Q8R4E9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Cdt1Q8R4E9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdt1Q8R4E9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms