Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.93■■□□□ 1.1
Rnf113a1Q8R3P8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf113a1Q8R3P8 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.92■■□□□ 1.1
Rnf113a1Q8R3P8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Rnf113a1Q8R3P8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf113a1Q8R3P8 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.9■■□□□ 1.1
Rnf113a1Q8R3P8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf113a1Q8R3P8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf113a1Q8R3P8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf113a1Q8R3P8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf113a1Q8R3P8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf113a1Q8R3P8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.87■■□□□ 1.09
Rnf113a1Q8R3P8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Rnf113a1Q8R3P8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf113a1Q8R3P8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf113a1Q8R3P8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf113a1Q8R3P8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf113a1Q8R3P8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf113a1Q8R3P8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf113a1Q8R3P8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rnf113a1Q8R3P8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf113a1Q8R3P8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf113a1Q8R3P8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf113a1Q8R3P8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.8■■□□□ 1.08
Rnf113a1Q8R3P8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf113a1Q8R3P8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf113a1Q8R3P8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf113a1Q8R3P8 Gm45855-201ENSMUST00000212546 880 ntBASIC21.77■■□□□ 1.08
Rnf113a1Q8R3P8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf113a1Q8R3P8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf113a1Q8R3P8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.75■■□□□ 1.07
Rnf113a1Q8R3P8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf113a1Q8R3P8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rnf113a1Q8R3P8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rnf113a1Q8R3P8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf113a1Q8R3P8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf113a1Q8R3P8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf113a1Q8R3P8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf113a1Q8R3P8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rnf113a1Q8R3P8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf113a1Q8R3P8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf113a1Q8R3P8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf113a1Q8R3P8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf113a1Q8R3P8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf113a1Q8R3P8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf113a1Q8R3P8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf113a1Q8R3P8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf113a1Q8R3P8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf113a1Q8R3P8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf113a1Q8R3P8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf113a1Q8R3P8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
Rnf113a1Q8R3P8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf113a1Q8R3P8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf113a1Q8R3P8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf113a1Q8R3P8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf113a1Q8R3P8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf113a1Q8R3P8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf113a1Q8R3P8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf113a1Q8R3P8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Rnf113a1Q8R3P8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.6■■□□□ 1.05
Rnf113a1Q8R3P8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf113a1Q8R3P8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
Rnf113a1Q8R3P8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf113a1Q8R3P8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf113a1Q8R3P8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf113a1Q8R3P8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf113a1Q8R3P8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.59■■□□□ 1.05
Rnf113a1Q8R3P8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf113a1Q8R3P8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf113a1Q8R3P8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf113a1Q8R3P8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Rnf113a1Q8R3P8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.58■■□□□ 1.04
Rnf113a1Q8R3P8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf113a1Q8R3P8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.57■■□□□ 1.04
Rnf113a1Q8R3P8 Gm9397-201ENSMUST00000200125 605 ntBASIC21.57■■□□□ 1.04
Rnf113a1Q8R3P8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Rnf113a1Q8R3P8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf113a1Q8R3P8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf113a1Q8R3P8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf113a1Q8R3P8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf113a1Q8R3P8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf113a1Q8R3P8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf113a1Q8R3P8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.55■■□□□ 1.04
Rnf113a1Q8R3P8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.54■■□□□ 1.04
Rnf113a1Q8R3P8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf113a1Q8R3P8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf113a1Q8R3P8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf113a1Q8R3P8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf113a1Q8R3P8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf113a1Q8R3P8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf113a1Q8R3P8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf113a1Q8R3P8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf113a1Q8R3P8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf113a1Q8R3P8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf113a1Q8R3P8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf113a1Q8R3P8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf113a1Q8R3P8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf113a1Q8R3P8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf113a1Q8R3P8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf113a1Q8R3P8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 882.6 ms