Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cfap54Q8C6S9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.25■■□□□ 1.63
Cfap54Q8C6S9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cfap54Q8C6S9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cfap54Q8C6S9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cfap54Q8C6S9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cfap54Q8C6S9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cfap54Q8C6S9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.2■■□□□ 1.62
Cfap54Q8C6S9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cfap54Q8C6S9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cfap54Q8C6S9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Cfap54Q8C6S9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Cfap54Q8C6S9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cfap54Q8C6S9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.15■■□□□ 1.62
Cfap54Q8C6S9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Cfap54Q8C6S9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.13■■□□□ 1.61
Cfap54Q8C6S9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Cfap54Q8C6S9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cfap54Q8C6S9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cfap54Q8C6S9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.09■■□□□ 1.61
Cfap54Q8C6S9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Cfap54Q8C6S9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cfap54Q8C6S9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cfap54Q8C6S9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cfap54Q8C6S9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Cfap54Q8C6S9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.05■■□□□ 1.6
Cfap54Q8C6S9 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.04■■□□□ 1.6
Cfap54Q8C6S9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Cfap54Q8C6S9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cfap54Q8C6S9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cfap54Q8C6S9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Cfap54Q8C6S9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cfap54Q8C6S9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.99■■□□□ 1.59
Cfap54Q8C6S9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cfap54Q8C6S9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.97■■□□□ 1.59
Cfap54Q8C6S9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Cfap54Q8C6S9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
Cfap54Q8C6S9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cfap54Q8C6S9 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.92■■□□□ 1.58
Cfap54Q8C6S9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cfap54Q8C6S9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cfap54Q8C6S9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cfap54Q8C6S9 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.9■■□□□ 1.58
Cfap54Q8C6S9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Cfap54Q8C6S9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cfap54Q8C6S9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cfap54Q8C6S9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.89■■□□□ 1.58
Cfap54Q8C6S9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cfap54Q8C6S9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cfap54Q8C6S9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.87■■□□□ 1.57
Cfap54Q8C6S9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Cfap54Q8C6S9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cfap54Q8C6S9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Cfap54Q8C6S9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
Cfap54Q8C6S9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Cfap54Q8C6S9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cfap54Q8C6S9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cfap54Q8C6S9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
Cfap54Q8C6S9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
Cfap54Q8C6S9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cfap54Q8C6S9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.83■■□□□ 1.56
Cfap54Q8C6S9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Cfap54Q8C6S9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Cfap54Q8C6S9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.81■■□□□ 1.56
Cfap54Q8C6S9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cfap54Q8C6S9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.81■■□□□ 1.56
Cfap54Q8C6S9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.81■■□□□ 1.56
Cfap54Q8C6S9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.79■■□□□ 1.56
Cfap54Q8C6S9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cfap54Q8C6S9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Cfap54Q8C6S9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap54Q8C6S9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfap54Q8C6S9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap54Q8C6S9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cfap54Q8C6S9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cfap54Q8C6S9 Gm7432-201ENSMUST00000210343 879 ntBASIC24.74■■□□□ 1.55
Cfap54Q8C6S9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap54Q8C6S9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap54Q8C6S9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cfap54Q8C6S9 Mir6538-201ENSMUST00000183713 110 ntBASIC24.73■■□□□ 1.55
Cfap54Q8C6S9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap54Q8C6S9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cfap54Q8C6S9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cfap54Q8C6S9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Cfap54Q8C6S9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cfap54Q8C6S9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.7■■□□□ 1.55
Cfap54Q8C6S9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Cfap54Q8C6S9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.7■■□□□ 1.54
Cfap54Q8C6S9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cfap54Q8C6S9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cfap54Q8C6S9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cfap54Q8C6S9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cfap54Q8C6S9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.63■■□□□ 1.53
Cfap54Q8C6S9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms