Protein–RNA interactions for Protein: Q8C3Y4

Kntc1, Kinetochore-associated protein 1, mousemouse

Predictions only

Length 2,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kntc1Q8C3Y4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28,65■■■□□ 2,18
Kntc1Q8C3Y4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28,64■■■□□ 2,18
Kntc1Q8C3Y4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28,63■■■□□ 2,17
Kntc1Q8C3Y4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Kntc1Q8C3Y4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28,57■■■□□ 2,16
Kntc1Q8C3Y4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28,55■■■□□ 2,16
Kntc1Q8C3Y4 Gm43863-201ENSMUST00000203822 1192 ntBASIC28,55■■■□□ 2,16
Kntc1Q8C3Y4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Kntc1Q8C3Y4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28,51■■■□□ 2,15
Kntc1Q8C3Y4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28,49■■■□□ 2,15
Kntc1Q8C3Y4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Kntc1Q8C3Y4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Kntc1Q8C3Y4 AC157572.2-201ENSMUST00000226970 908 ntBASIC28,48■■■□□ 2,15
Kntc1Q8C3Y4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Kntc1Q8C3Y4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28,47■■■□□ 2,15
Kntc1Q8C3Y4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28,44■■■□□ 2,14
Kntc1Q8C3Y4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Kntc1Q8C3Y4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28,42■■■□□ 2,14
Kntc1Q8C3Y4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Kntc1Q8C3Y4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28,4■■■□□ 2,14
Kntc1Q8C3Y4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Kntc1Q8C3Y4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28,39■■■□□ 2,14
Kntc1Q8C3Y4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,13
Kntc1Q8C3Y4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28,39■■■□□ 2,13
Kntc1Q8C3Y4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Kntc1Q8C3Y4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28,37■■■□□ 2,13
Kntc1Q8C3Y4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28,37■■■□□ 2,13
Kntc1Q8C3Y4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28,37■■■□□ 2,13
Kntc1Q8C3Y4 Gm7432-201ENSMUST00000210343 879 ntBASIC28,37■■■□□ 2,13
Kntc1Q8C3Y4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28,37■■■□□ 2,13
Kntc1Q8C3Y4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28,35■■■□□ 2,13
Kntc1Q8C3Y4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28,34■■■□□ 2,13
Kntc1Q8C3Y4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28,3■■■□□ 2,12
Kntc1Q8C3Y4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Kntc1Q8C3Y4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28,28■■■□□ 2,12
Kntc1Q8C3Y4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28,27■■■□□ 2,12
Kntc1Q8C3Y4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28,27■■■□□ 2,12
Kntc1Q8C3Y4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,25■■■□□ 2,11
Kntc1Q8C3Y4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28,25■■■□□ 2,11
Kntc1Q8C3Y4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,24■■■□□ 2,11
Kntc1Q8C3Y4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28,22■■■□□ 2,11
Kntc1Q8C3Y4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28,22■■■□□ 2,11
Kntc1Q8C3Y4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Kntc1Q8C3Y4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28,2■■■□□ 2,11
Kntc1Q8C3Y4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28,2■■■□□ 2,11
Kntc1Q8C3Y4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28,2■■■□□ 2,1
Kntc1Q8C3Y4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28,2■■■□□ 2,1
Kntc1Q8C3Y4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28,2■■■□□ 2,1
Kntc1Q8C3Y4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28,18■■■□□ 2,1
Kntc1Q8C3Y4 Mir6538-201ENSMUST00000183713 110 ntBASIC28,18■■■□□ 2,1
Kntc1Q8C3Y4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28,16■■■□□ 2,1
Kntc1Q8C3Y4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28,16■■■□□ 2,1
Kntc1Q8C3Y4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Kntc1Q8C3Y4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28,15■■■□□ 2,1
Kntc1Q8C3Y4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28,15■■■□□ 2,1
Kntc1Q8C3Y4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28,14■■■□□ 2,1
Kntc1Q8C3Y4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Kntc1Q8C3Y4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28,14■■■□□ 2,09
Kntc1Q8C3Y4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28,14■■■□□ 2,09
Kntc1Q8C3Y4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28,13■■■□□ 2,09
Kntc1Q8C3Y4 Gm11175-201ENSMUST00000116172 543 ntBASIC28,12■■■□□ 2,09
Kntc1Q8C3Y4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28,12■■■□□ 2,09
Kntc1Q8C3Y4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28,11■■■□□ 2,09
Kntc1Q8C3Y4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28,11■■■□□ 2,09
Kntc1Q8C3Y4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28,1■■■□□ 2,09
Kntc1Q8C3Y4 Gm11599-201ENSMUST00000118720 878 ntBASIC28,1■■■□□ 2,09
Kntc1Q8C3Y4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28,09■■■□□ 2,09
Kntc1Q8C3Y4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Kntc1Q8C3Y4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Kntc1Q8C3Y4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28,08■■■□□ 2,08
Kntc1Q8C3Y4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Kntc1Q8C3Y4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Kntc1Q8C3Y4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28,06■■■□□ 2,08
Kntc1Q8C3Y4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28,06■■■□□ 2,08
Kntc1Q8C3Y4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28,05■■■□□ 2,08
Kntc1Q8C3Y4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28,05■■■□□ 2,08
Kntc1Q8C3Y4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28,03■■■□□ 2,08
Kntc1Q8C3Y4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Kntc1Q8C3Y4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Kntc1Q8C3Y4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28,01■■■□□ 2,08
Kntc1Q8C3Y4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28,01■■■□□ 2,07
Kntc1Q8C3Y4 Cap2-205ENSMUST00000225824 1634 ntBASIC28,01■■■□□ 2,07
Kntc1Q8C3Y4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28■■■□□ 2,07
Kntc1Q8C3Y4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Kntc1Q8C3Y4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27,99■■■□□ 2,07
Kntc1Q8C3Y4 Nkain2-201ENSMUST00000092602 558 ntBASIC27,98■■■□□ 2,07
Kntc1Q8C3Y4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27,96■■■□□ 2,07
Kntc1Q8C3Y4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27,96■■■□□ 2,07
Kntc1Q8C3Y4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27,96■■■□□ 2,07
Kntc1Q8C3Y4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,07
Kntc1Q8C3Y4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,06
Kntc1Q8C3Y4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27,95■■■□□ 2,06
Kntc1Q8C3Y4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27,94■■■□□ 2,06
Kntc1Q8C3Y4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27,92■■■□□ 2,06
Kntc1Q8C3Y4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27,91■■■□□ 2,06
Kntc1Q8C3Y4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27,91■■■□□ 2,06
Kntc1Q8C3Y4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27,9■■■□□ 2,06
Kntc1Q8C3Y4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27,89■■■□□ 2,06
Kntc1Q8C3Y4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27,87■■■□□ 2,05
Kntc1Q8C3Y4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27,87■■■□□ 2,05
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms