Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Vps13bQ80TY5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps13bQ80TY5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps13bQ80TY5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps13bQ80TY5 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.94■□□□□ 0.14
Vps13bQ80TY5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps13bQ80TY5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps13bQ80TY5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vps13bQ80TY5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps13bQ80TY5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps13bQ80TY5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps13bQ80TY5 Mir6538-201ENSMUST00000183713 110 ntBASIC15.87■□□□□ 0.13
Vps13bQ80TY5 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.87■□□□□ 0.13
Vps13bQ80TY5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps13bQ80TY5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps13bQ80TY5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps13bQ80TY5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Gm7432-201ENSMUST00000210343 879 ntBASIC15.83■□□□□ 0.13
Vps13bQ80TY5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Vps13bQ80TY5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Vps13bQ80TY5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13bQ80TY5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps13bQ80TY5 Gm11175-201ENSMUST00000116172 543 ntBASIC15.8■□□□□ 0.12
Vps13bQ80TY5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13bQ80TY5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13bQ80TY5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13bQ80TY5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13bQ80TY5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps13bQ80TY5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13bQ80TY5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13bQ80TY5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Vps13bQ80TY5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13bQ80TY5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13bQ80TY5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13bQ80TY5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13bQ80TY5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13bQ80TY5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13bQ80TY5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps13bQ80TY5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps13bQ80TY5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vps13bQ80TY5 Gm11599-201ENSMUST00000118720 878 ntBASIC15.66■□□□□ 0.1
Vps13bQ80TY5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps13bQ80TY5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps13bQ80TY5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps13bQ80TY5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps13bQ80TY5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps13bQ80TY5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps13bQ80TY5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps13bQ80TY5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps13bQ80TY5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
Vps13bQ80TY5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps13bQ80TY5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Vps13bQ80TY5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vps13bQ80TY5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13bQ80TY5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms