Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Sned1Q70E20 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.45■■■□□ 2.79
Sned1Q70E20 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
Sned1Q70E20 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Sned1Q70E20 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
Sned1Q70E20 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.42■■■□□ 2.78
Sned1Q70E20 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
Sned1Q70E20 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Sned1Q70E20 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Sned1Q70E20 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Sned1Q70E20 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Sned1Q70E20 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.36■■■□□ 2.77
Sned1Q70E20 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Sned1Q70E20 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.34■■■□□ 2.77
Sned1Q70E20 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Sned1Q70E20 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Sned1Q70E20 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Sned1Q70E20 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.29■■■□□ 2.76
Sned1Q70E20 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Sned1Q70E20 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Sned1Q70E20 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Sned1Q70E20 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Sned1Q70E20 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
Sned1Q70E20 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Sned1Q70E20 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
Sned1Q70E20 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.19■■■□□ 2.74
Sned1Q70E20 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Sned1Q70E20 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Sned1Q70E20 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Sned1Q70E20 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.17■■■□□ 2.74
Sned1Q70E20 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
Sned1Q70E20 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.15■■■□□ 2.74
Sned1Q70E20 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.14■■■□□ 2.74
Sned1Q70E20 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Sned1Q70E20 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Sned1Q70E20 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.1■■■□□ 2.73
Sned1Q70E20 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Sned1Q70E20 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Sned1Q70E20 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32.08■■■□□ 2.73
Sned1Q70E20 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Sned1Q70E20 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.05■■■□□ 2.72
Sned1Q70E20 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Sned1Q70E20 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.05■■■□□ 2.72
Sned1Q70E20 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Sned1Q70E20 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Sned1Q70E20 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32■■■□□ 2.71
Sned1Q70E20 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Sned1Q70E20 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Sned1Q70E20 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.98■■■□□ 2.71
Sned1Q70E20 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Sned1Q70E20 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Sned1Q70E20 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Sned1Q70E20 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Sned1Q70E20 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Sned1Q70E20 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Sned1Q70E20 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Sned1Q70E20 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Sned1Q70E20 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Sned1Q70E20 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sned1Q70E20 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sned1Q70E20 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Sned1Q70E20 Nkain2-201ENSMUST00000092602 558 ntBASIC31.9■■■□□ 2.7
Sned1Q70E20 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
Sned1Q70E20 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Sned1Q70E20 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Sned1Q70E20 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.89■■■□□ 2.7
Sned1Q70E20 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
Sned1Q70E20 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Sned1Q70E20 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Sned1Q70E20 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Sned1Q70E20 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Sned1Q70E20 Gm7432-201ENSMUST00000210343 879 ntBASIC31.84■■■□□ 2.69
Sned1Q70E20 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Sned1Q70E20 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.83■■■□□ 2.69
Sned1Q70E20 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Sned1Q70E20 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.82■■■□□ 2.68
Sned1Q70E20 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Sned1Q70E20 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.81■■■□□ 2.68
Sned1Q70E20 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Sned1Q70E20 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Sned1Q70E20 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Sned1Q70E20 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Sned1Q70E20 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.78■■■□□ 2.68
Sned1Q70E20 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Sned1Q70E20 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Sned1Q70E20 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Sned1Q70E20 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Sned1Q70E20 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.75■■■□□ 2.67
Sned1Q70E20 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Sned1Q70E20 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.74■■■□□ 2.67
Sned1Q70E20 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Sned1Q70E20 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
Sned1Q70E20 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Sned1Q70E20 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
Sned1Q70E20 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Sned1Q70E20 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Sned1Q70E20 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Sned1Q70E20 Gm11175-201ENSMUST00000116172 543 ntBASIC31.65■■■□□ 2.66
Sned1Q70E20 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Sned1Q70E20 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms