Protein–RNA interactions for Protein: Q6P4U0

Thsd7b, Thrombospondin type-1 domain-containing protein 7B, mousemouse

Predictions only

Length 1,607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd7bQ6P4U0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30,6■■■□□ 2,49
Thsd7bQ6P4U0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30,6■■■□□ 2,49
Thsd7bQ6P4U0 Gm43863-201ENSMUST00000203822 1192 ntBASIC30,59■■■□□ 2,49
Thsd7bQ6P4U0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Thsd7bQ6P4U0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30,56■■■□□ 2,48
Thsd7bQ6P4U0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30,56■■■□□ 2,48
Thsd7bQ6P4U0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30,56■■■□□ 2,48
Thsd7bQ6P4U0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30,55■■■□□ 2,48
Thsd7bQ6P4U0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30,55■■■□□ 2,48
Thsd7bQ6P4U0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Thsd7bQ6P4U0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Thsd7bQ6P4U0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30,52■■■□□ 2,48
Thsd7bQ6P4U0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30,51■■■□□ 2,48
Thsd7bQ6P4U0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30,51■■■□□ 2,48
Thsd7bQ6P4U0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30,51■■■□□ 2,47
Thsd7bQ6P4U0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Thsd7bQ6P4U0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Thsd7bQ6P4U0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Thsd7bQ6P4U0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Thsd7bQ6P4U0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30,44■■■□□ 2,46
Thsd7bQ6P4U0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30,44■■■□□ 2,46
Thsd7bQ6P4U0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Thsd7bQ6P4U0 AC157572.2-201ENSMUST00000226970 908 ntBASIC30,43■■■□□ 2,46
Thsd7bQ6P4U0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30,43■■■□□ 2,46
Thsd7bQ6P4U0 Mir6538-201ENSMUST00000183713 110 ntBASIC30,42■■■□□ 2,46
Thsd7bQ6P4U0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Thsd7bQ6P4U0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30,41■■■□□ 2,46
Thsd7bQ6P4U0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Thsd7bQ6P4U0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Thsd7bQ6P4U0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Thsd7bQ6P4U0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30,36■■■□□ 2,45
Thsd7bQ6P4U0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Thsd7bQ6P4U0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30,35■■■□□ 2,45
Thsd7bQ6P4U0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30,34■■■□□ 2,45
Thsd7bQ6P4U0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30,34■■■□□ 2,45
Thsd7bQ6P4U0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30,33■■■□□ 2,45
Thsd7bQ6P4U0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Thsd7bQ6P4U0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Thsd7bQ6P4U0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Thsd7bQ6P4U0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Thsd7bQ6P4U0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Thsd7bQ6P4U0 Gm11175-201ENSMUST00000116172 543 ntBASIC30,29■■■□□ 2,44
Thsd7bQ6P4U0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30,28■■■□□ 2,44
Thsd7bQ6P4U0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Thsd7bQ6P4U0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30,27■■■□□ 2,44
Thsd7bQ6P4U0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30,26■■■□□ 2,44
Thsd7bQ6P4U0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30,26■■■□□ 2,44
Thsd7bQ6P4U0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30,25■■■□□ 2,43
Thsd7bQ6P4U0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Thsd7bQ6P4U0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30,24■■■□□ 2,43
Thsd7bQ6P4U0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30,22■■■□□ 2,43
Thsd7bQ6P4U0 Gm7432-201ENSMUST00000210343 879 ntBASIC30,22■■■□□ 2,43
Thsd7bQ6P4U0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30,21■■■□□ 2,43
Thsd7bQ6P4U0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,19■■■□□ 2,42
Thsd7bQ6P4U0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30,18■■■□□ 2,42
Thsd7bQ6P4U0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30,18■■■□□ 2,42
Thsd7bQ6P4U0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30,18■■■□□ 2,42
Thsd7bQ6P4U0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Thsd7bQ6P4U0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30,14■■■□□ 2,42
Thsd7bQ6P4U0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,42
Thsd7bQ6P4U0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Thsd7bQ6P4U0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Thsd7bQ6P4U0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Thsd7bQ6P4U0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30,12■■■□□ 2,41
Thsd7bQ6P4U0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30,12■■■□□ 2,41
Thsd7bQ6P4U0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30,11■■■□□ 2,41
Thsd7bQ6P4U0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30,11■■■□□ 2,41
Thsd7bQ6P4U0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Thsd7bQ6P4U0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30,11■■■□□ 2,41
Thsd7bQ6P4U0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Thsd7bQ6P4U0 Gm11599-201ENSMUST00000118720 878 ntBASIC30,08■■■□□ 2,41
Thsd7bQ6P4U0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30,07■■■□□ 2,4
Thsd7bQ6P4U0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Thsd7bQ6P4U0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30,06■■■□□ 2,4
Thsd7bQ6P4U0 Nkain2-201ENSMUST00000092602 558 ntBASIC30,06■■■□□ 2,4
Thsd7bQ6P4U0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30,06■■■□□ 2,4
Thsd7bQ6P4U0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Thsd7bQ6P4U0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30,05■■■□□ 2,4
Thsd7bQ6P4U0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30,01■■■□□ 2,39
Thsd7bQ6P4U0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30■■■□□ 2,39
Thsd7bQ6P4U0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Thsd7bQ6P4U0 Cap2-205ENSMUST00000225824 1634 ntBASIC29,98■■■□□ 2,39
Thsd7bQ6P4U0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Thsd7bQ6P4U0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29,98■■■□□ 2,39
Thsd7bQ6P4U0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Thsd7bQ6P4U0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Thsd7bQ6P4U0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Thsd7bQ6P4U0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29,96■■■□□ 2,39
Thsd7bQ6P4U0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29,95■■■□□ 2,39
Thsd7bQ6P4U0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29,95■■■□□ 2,39
Thsd7bQ6P4U0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29,95■■■□□ 2,38
Thsd7bQ6P4U0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29,94■■■□□ 2,38
Thsd7bQ6P4U0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29,93■■■□□ 2,38
Thsd7bQ6P4U0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29,92■■■□□ 2,38
Thsd7bQ6P4U0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Thsd7bQ6P4U0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29,92■■■□□ 2,38
Thsd7bQ6P4U0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29,91■■■□□ 2,38
Thsd7bQ6P4U0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC29,89■■■□□ 2,38
Thsd7bQ6P4U0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29,89■■■□□ 2,37
Thsd7bQ6P4U0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Retrieved 100 of 76,532 protein–RNA pairs in 27,2 ms