Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxc2Q61850 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxc2Q61850 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxc2Q61850 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxc2Q61850 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxc2Q61850 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Foxc2Q61850 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.57■□□□□ 0.72
Foxc2Q61850 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Foxc2Q61850 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Foxc2Q61850 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Foxc2Q61850 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.55■□□□□ 0.72
Foxc2Q61850 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.55■□□□□ 0.72
Foxc2Q61850 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.54■□□□□ 0.72
Foxc2Q61850 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Foxc2Q61850 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxc2Q61850 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxc2Q61850 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.53■□□□□ 0.72
Foxc2Q61850 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxc2Q61850 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.52■□□□□ 0.72
Foxc2Q61850 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Foxc2Q61850 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.51■□□□□ 0.71
Foxc2Q61850 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc2Q61850 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc2Q61850 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.5■□□□□ 0.71
Foxc2Q61850 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc2Q61850 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Foxc2Q61850 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Foxc2Q61850 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxc2Q61850 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxc2Q61850 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxc2Q61850 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Foxc2Q61850 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Foxc2Q61850 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Foxc2Q61850 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Foxc2Q61850 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxc2Q61850 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxc2Q61850 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxc2Q61850 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxc2Q61850 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.43■□□□□ 0.7
Foxc2Q61850 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.43■□□□□ 0.7
Foxc2Q61850 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Foxc2Q61850 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxc2Q61850 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Foxc2Q61850 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxc2Q61850 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxc2Q61850 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.39■□□□□ 0.69
Foxc2Q61850 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxc2Q61850 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxc2Q61850 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxc2Q61850 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxc2Q61850 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Foxc2Q61850 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxc2Q61850 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxc2Q61850 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxc2Q61850 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Foxc2Q61850 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxc2Q61850 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxc2Q61850 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxc2Q61850 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxc2Q61850 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Foxc2Q61850 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxc2Q61850 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxc2Q61850 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxc2Q61850 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxc2Q61850 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxc2Q61850 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Foxc2Q61850 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxc2Q61850 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxc2Q61850 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxc2Q61850 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Foxc2Q61850 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.25■□□□□ 0.67
Foxc2Q61850 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxc2Q61850 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxc2Q61850 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.23■□□□□ 0.67
Foxc2Q61850 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Foxc2Q61850 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxc2Q61850 Gm45855-201ENSMUST00000212546 880 ntBASIC19.22■□□□□ 0.67
Foxc2Q61850 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms