Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrrk2Q5S006 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.28■■□□□ 1.32
Lrrk2Q5S006 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Lrrk2Q5S006 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.26■■□□□ 1.31
Lrrk2Q5S006 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrk2Q5S006 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.25■■□□□ 1.31
Lrrk2Q5S006 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrrk2Q5S006 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrrk2Q5S006 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.23■■□□□ 1.31
Lrrk2Q5S006 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrk2Q5S006 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lrrk2Q5S006 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lrrk2Q5S006 Mir6538-201ENSMUST00000183713 110 ntBASIC23.22■■□□□ 1.31
Lrrk2Q5S006 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.21■■□□□ 1.31
Lrrk2Q5S006 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Lrrk2Q5S006 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrrk2Q5S006 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Lrrk2Q5S006 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Lrrk2Q5S006 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.18■■□□□ 1.3
Lrrk2Q5S006 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lrrk2Q5S006 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Lrrk2Q5S006 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrrk2Q5S006 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Lrrk2Q5S006 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.14■■□□□ 1.29
Lrrk2Q5S006 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Lrrk2Q5S006 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.13■■□□□ 1.29
Lrrk2Q5S006 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.12■■□□□ 1.29
Lrrk2Q5S006 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lrrk2Q5S006 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lrrk2Q5S006 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Lrrk2Q5S006 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Lrrk2Q5S006 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Lrrk2Q5S006 Gm11175-201ENSMUST00000116172 543 ntBASIC23.05■■□□□ 1.28
Lrrk2Q5S006 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrk2Q5S006 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrk2Q5S006 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.05■■□□□ 1.28
Lrrk2Q5S006 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrk2Q5S006 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrk2Q5S006 Gm11599-201ENSMUST00000118720 878 ntBASIC23.04■■□□□ 1.28
Lrrk2Q5S006 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrk2Q5S006 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Lrrk2Q5S006 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.02■■□□□ 1.28
Lrrk2Q5S006 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Lrrk2Q5S006 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23■■□□□ 1.27
Lrrk2Q5S006 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23■■□□□ 1.27
Lrrk2Q5S006 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23■■□□□ 1.27
Lrrk2Q5S006 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lrrk2Q5S006 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lrrk2Q5S006 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lrrk2Q5S006 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Lrrk2Q5S006 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lrrk2Q5S006 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lrrk2Q5S006 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Lrrk2Q5S006 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrk2Q5S006 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrk2Q5S006 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
Lrrk2Q5S006 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrk2Q5S006 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrk2Q5S006 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Lrrk2Q5S006 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Lrrk2Q5S006 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrk2Q5S006 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrk2Q5S006 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Lrrk2Q5S006 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Lrrk2Q5S006 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lrrk2Q5S006 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lrrk2Q5S006 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Lrrk2Q5S006 Cap2-205ENSMUST00000225824 1634 ntBASIC22.87■■□□□ 1.25
Lrrk2Q5S006 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Lrrk2Q5S006 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lrrk2Q5S006 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrk2Q5S006 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrk2Q5S006 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrk2Q5S006 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Lrrk2Q5S006 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lrrk2Q5S006 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.83■■□□□ 1.25
Lrrk2Q5S006 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Lrrk2Q5S006 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Lrrk2Q5S006 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.83■■□□□ 1.25
Lrrk2Q5S006 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Lrrk2Q5S006 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.82■■□□□ 1.24
Lrrk2Q5S006 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Lrrk2Q5S006 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Lrrk2Q5S006 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Lrrk2Q5S006 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Lrrk2Q5S006 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Lrrk2Q5S006 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lrrk2Q5S006 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lrrk2Q5S006 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Lrrk2Q5S006 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lrrk2Q5S006 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lrrk2Q5S006 Nkain2-201ENSMUST00000092602 558 ntBASIC22.75■■□□□ 1.23
Lrrk2Q5S006 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.73■■□□□ 1.23
Lrrk2Q5S006 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.73■■□□□ 1.23
Lrrk2Q5S006 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lrrk2Q5S006 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Lrrk2Q5S006 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lrrk2Q5S006 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lrrk2Q5S006 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.72■■□□□ 1.23
Lrrk2Q5S006 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 1309.7 ms