Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7-2Q5R1I3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7-2Q5R1I3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav7-2Q5R1I3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-2Q5R1I3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-2Q5R1I3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trav7-2Q5R1I3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-2Q5R1I3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav7-2Q5R1I3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-2Q5R1I3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-2Q5R1I3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-2Q5R1I3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trav7-2Q5R1I3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-2Q5R1I3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-2Q5R1I3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-2Q5R1I3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-2Q5R1I3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-2Q5R1I3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-2Q5R1I3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-2Q5R1I3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trav7-2Q5R1I3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-2Q5R1I3 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.37■□□□□ 0.53
Trav7-2Q5R1I3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-2Q5R1I3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav7-2Q5R1I3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-2Q5R1I3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7-2Q5R1I3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Trav7-2Q5R1I3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7-2Q5R1I3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
Trav7-2Q5R1I3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7-2Q5R1I3 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.33■□□□□ 0.52
Trav7-2Q5R1I3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7-2Q5R1I3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav7-2Q5R1I3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Trav7-2Q5R1I3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-2Q5R1I3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-2Q5R1I3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-2Q5R1I3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-2Q5R1I3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-2Q5R1I3 Gm16148-201ENSMUST00000119653 893 ntBASIC18.3■□□□□ 0.52
Trav7-2Q5R1I3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav7-2Q5R1I3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.3■□□□□ 0.52
Trav7-2Q5R1I3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-2Q5R1I3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-2Q5R1I3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-2Q5R1I3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-2Q5R1I3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-2Q5R1I3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-2Q5R1I3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav7-2Q5R1I3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-2Q5R1I3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-2Q5R1I3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Trav7-2Q5R1I3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav7-2Q5R1I3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav7-2Q5R1I3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-2Q5R1I3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-2Q5R1I3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-2Q5R1I3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.24■□□□□ 0.51
Trav7-2Q5R1I3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7-2Q5R1I3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.23■□□□□ 0.51
Trav7-2Q5R1I3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7-2Q5R1I3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-2Q5R1I3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-2Q5R1I3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-2Q5R1I3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-2Q5R1I3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-2Q5R1I3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-2Q5R1I3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-2Q5R1I3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav7-2Q5R1I3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-2Q5R1I3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-2Q5R1I3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-2Q5R1I3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-2Q5R1I3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-2Q5R1I3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-2Q5R1I3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-2Q5R1I3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-2Q5R1I3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-2Q5R1I3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav7-2Q5R1I3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-2Q5R1I3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-2Q5R1I3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav7-2Q5R1I3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-2Q5R1I3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Trav7-2Q5R1I3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-2Q5R1I3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Trav7-2Q5R1I3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-2Q5R1I3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-2Q5R1I3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav7-2Q5R1I3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-2Q5R1I3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-2Q5R1I3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-2Q5R1I3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-2Q5R1I3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav7-2Q5R1I3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-2Q5R1I3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-2Q5R1I3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-2Q5R1I3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-2Q5R1I3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-2Q5R1I3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms