Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.83■■□□□ 1.89
Syn1O88935 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Syn1O88935 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Syn1O88935 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Syn1O88935 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.79■■□□□ 1.88
Syn1O88935 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Syn1O88935 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.78■■□□□ 1.88
Syn1O88935 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Syn1O88935 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Syn1O88935 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Syn1O88935 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Syn1O88935 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Syn1O88935 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.75■■□□□ 1.87
Syn1O88935 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.75■■□□□ 1.87
Syn1O88935 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Syn1O88935 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.74■■□□□ 1.87
Syn1O88935 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Syn1O88935 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Syn1O88935 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Syn1O88935 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Syn1O88935 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.72■■□□□ 1.87
Syn1O88935 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Syn1O88935 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Syn1O88935 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Syn1O88935 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Syn1O88935 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Syn1O88935 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Syn1O88935 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.65■■□□□ 1.86
Syn1O88935 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
Syn1O88935 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Syn1O88935 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Syn1O88935 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.64■■□□□ 1.86
Syn1O88935 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.63■■□□□ 1.85
Syn1O88935 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Syn1O88935 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.6■■□□□ 1.85
Syn1O88935 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Syn1O88935 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Syn1O88935 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Syn1O88935 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Syn1O88935 Gm7432-201ENSMUST00000210343 879 ntBASIC26.54■■□□□ 1.84
Syn1O88935 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Syn1O88935 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Syn1O88935 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.53■■□□□ 1.84
Syn1O88935 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Syn1O88935 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Syn1O88935 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Syn1O88935 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Syn1O88935 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
Syn1O88935 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
Syn1O88935 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Syn1O88935 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Syn1O88935 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.49■■□□□ 1.83
Syn1O88935 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Syn1O88935 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.48■■□□□ 1.83
Syn1O88935 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.47■■□□□ 1.83
Syn1O88935 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Syn1O88935 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Syn1O88935 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Syn1O88935 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.43■■□□□ 1.82
Syn1O88935 Nkain2-201ENSMUST00000092602 558 ntBASIC26.43■■□□□ 1.82
Syn1O88935 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Syn1O88935 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Syn1O88935 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Syn1O88935 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Syn1O88935 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Syn1O88935 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Syn1O88935 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Syn1O88935 Mir6538-201ENSMUST00000183713 110 ntBASIC26.38■■□□□ 1.81
Syn1O88935 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.36■■□□□ 1.81
Syn1O88935 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.36■■□□□ 1.81
Syn1O88935 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Syn1O88935 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Syn1O88935 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Syn1O88935 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Syn1O88935 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Syn1O88935 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Syn1O88935 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Syn1O88935 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.31■■□□□ 1.8
Syn1O88935 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.31■■□□□ 1.8
Syn1O88935 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Syn1O88935 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Syn1O88935 Gm11599-201ENSMUST00000118720 878 ntBASIC26.3■■□□□ 1.8
Syn1O88935 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Syn1O88935 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Syn1O88935 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Syn1O88935 Cap2-205ENSMUST00000225824 1634 ntBASIC26.29■■□□□ 1.8
Syn1O88935 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Syn1O88935 Gm11175-201ENSMUST00000116172 543 ntBASIC26.29■■□□□ 1.8
Syn1O88935 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Syn1O88935 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.27■■□□□ 1.8
Syn1O88935 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Syn1O88935 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Syn1O88935 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Syn1O88935 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Syn1O88935 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Syn1O88935 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Syn1O88935 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Syn1O88935 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Syn1O88935 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Syn1O88935 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms