Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13n-1A0A0G2JEU8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13n-1A0A0G2JEU8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13n-1A0A0G2JEU8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav13n-1A0A0G2JEU8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Gm9397-201ENSMUST00000200125 605 ntBASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.97■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Trav13n-1A0A0G2JEU8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-1A0A0G2JEU8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.94■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13n-1A0A0G2JEU8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-1A0A0G2JEU8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav13n-1A0A0G2JEU8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13n-1A0A0G2JEU8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-1A0A0G2JEU8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav13n-1A0A0G2JEU8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Zxda-201ENSMUST00000117281 2621 ntBASIC17.85■□□□□ 0.45
Trav13n-1A0A0G2JEU8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav13n-1A0A0G2JEU8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Gm24970-201ENSMUST00000175582 82 ntBASIC17.81■□□□□ 0.44
Trav13n-1A0A0G2JEU8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.81■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav13n-1A0A0G2JEU8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13n-1A0A0G2JEU8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.76■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-1A0A0G2JEU8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms