Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SLC1A1P43005 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC12.88□□□□□ -0.35
SLC1A1P43005 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC099328.1-201ENST00000498809 1030 ntBASIC12.88□□□□□ -0.35
SLC1A1P43005 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC092284.1-201ENST00000511386 1289 ntBASIC12.88□□□□□ -0.35
SLC1A1P43005 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC12.88□□□□□ -0.35
SLC1A1P43005 MYL6-215ENST00000549566 685 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC087699.1-201ENST00000558111 393 ntBASIC12.88□□□□□ -0.35
SLC1A1P43005 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AL035420.3-201ENST00000619647 321 ntBASIC12.88□□□□□ -0.35
SLC1A1P43005 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 SLC9A3P1-201ENST00000426317 1685 ntBASIC12.88□□□□□ -0.35
SLC1A1P43005 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 PAX9-201ENST00000361487 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 DPY19L2P1-202ENST00000454445 2909 ntBASIC12.88□□□□□ -0.35
SLC1A1P43005 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 ETFDH-201ENST00000307738 1903 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC1A1P43005 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SLC1A1P43005 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SLC1A1P43005 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 ZNF180-211ENST00000592529 3048 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 LINC02211-203ENST00000642022 2816 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SLC1A1P43005 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.87□□□□□ -0.35
SLC1A1P43005 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SLC1A1P43005 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SLC1A1P43005 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SLC1A1P43005 SNORD88B-201ENST00000408454 91 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 AKIRIN1P2-201ENST00000440655 570 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 AC244197.1-201ENST00000456494 951 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 JPT1-208ENST00000481647 576 ntTSL 5 BASIC12.87□□□□□ -0.35
SLC1A1P43005 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 NUP210P2-201ENST00000510577 282 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 SEMA6A-AS1-205ENST00000512128 479 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 MIR2278-201ENST00000516344 96 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 C16orf52-204ENST00000562695 695 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.87□□□□□ -0.35
SLC1A1P43005 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SLC1A1P43005 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.87□□□□□ -0.35
SLC1A1P43005 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 C2-211ENST00000469372 1906 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 CLDN4-203ENST00000435050 4163 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 SCNN1B-207ENST00000568085 1825 ntTSL 3 BASIC12.87□□□□□ -0.35
SLC1A1P43005 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
SLC1A1P43005 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 AC090061.1-201ENST00000500695 1733 ntTSL 5 BASIC12.87□□□□□ -0.35
SLC1A1P43005 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.87□□□□□ -0.35
SLC1A1P43005 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC1A1P43005 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms