Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 RHBDL2-202ENST00000372990 1837 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC000077.1-201ENST00000420012 953 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 KRT17P4-201ENST00000429445 819 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 RN7SL22P-201ENST00000471800 269 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AL157792.1-201ENST00000488281 530 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.93□□□□□ -0.34
SLC1A1P43005 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 PEBP1P1-201ENST00000554856 510 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 MIR3183-201ENST00000578566 84 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 RN7SL732P-201ENST00000581157 300 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 PRMT1P1-201ENST00000604252 1009 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.93□□□□□ -0.34
SLC1A1P43005 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AP000892.2-201ENST00000613535 324 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AL353626.2-201ENST00000615372 130 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 MEG8_1.1-201ENST00000617245 97 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC005072.1-201ENST00000606640 1779 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 AL512310.7-201ENST00000547785 2268 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC004847.1-201ENST00000568457 1911 ntBASIC12.93□□□□□ -0.34
SLC1A1P43005 MANBA-201ENST00000226578 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 INO80-211ENST00000616814 4272 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 PIK3AP1-202ENST00000371109 1766 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 C22orf23-206ENST00000619227 1777 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 KLRK1-201ENST00000240618 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 PTPA-219ENST00000435305 530 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC020917.1-201ENST00000494084 893 ntBASIC12.92□□□□□ -0.34
SLC1A1P43005 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.92□□□□□ -0.34
SLC1A1P43005 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.92□□□□□ -0.34
SLC1A1P43005 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC12.92□□□□□ -0.34
SLC1A1P43005 HP-215ENST00000569639 568 ntTSL 4 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AP2S1-209ENST00000601498 898 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 RPS9-213ENST00000626547 476 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms