Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLIC4Q9Y696 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLIC4Q9Y696 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CLIC4Q9Y696 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLIC4Q9Y696 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLIC4Q9Y696 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 SERBP1P1-201ENST00000396021 1160 ntBASIC24.79■■□□□ 1.56
CLIC4Q9Y696 AC131281.2-201ENST00000520478 145 ntBASIC24.79■■□□□ 1.56
CLIC4Q9Y696 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.79■■□□□ 1.56
CLIC4Q9Y696 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.78■■□□□ 1.56
CLIC4Q9Y696 OR2I1P-207ENST00000453522 948 ntBASIC24.78■■□□□ 1.56
CLIC4Q9Y696 AC079089.2-201ENST00000531211 1277 ntBASIC24.78■■□□□ 1.56
CLIC4Q9Y696 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CLIC4Q9Y696 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLIC4Q9Y696 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 AC092171.4-201ENST00000609130 632 ntBASIC24.76■■□□□ 1.55
CLIC4Q9Y696 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CLIC4Q9Y696 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.75■■□□□ 1.55
CLIC4Q9Y696 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CLIC4Q9Y696 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.74■■□□□ 1.55
CLIC4Q9Y696 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLIC4Q9Y696 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLIC4Q9Y696 AC026471.6-201ENST00000622954 1905 ntBASIC24.74■■□□□ 1.55
CLIC4Q9Y696 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLIC4Q9Y696 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLIC4Q9Y696 AC026310.3-201ENST00000625186 2373 ntBASIC24.74■■□□□ 1.55
CLIC4Q9Y696 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.73■■□□□ 1.55
CLIC4Q9Y696 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 SYT6-210ENST00000641643 1587 ntBASIC24.72■■□□□ 1.55
CLIC4Q9Y696 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLIC4Q9Y696 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLIC4Q9Y696 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.71■■□□□ 1.55
CLIC4Q9Y696 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CLIC4Q9Y696 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLIC4Q9Y696 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms