Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 AL137784.2-201ENST00000607332 1000 ntBASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA6Q9Y5G7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 CCDC92B-201ENST00000575506 885 ntBASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 IKBKGP1-201ENST00000612193 1073 ntBASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 LINC02228-203ENST00000641970 1355 ntBASIC20.85■□□□□ 0.93
PCDHGA6Q9Y5G7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 TERF1P2-201ENST00000583350 1212 ntBASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA6Q9Y5G7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 AC127496.7-201ENST00000625110 1798 ntBASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 AC090192.1-201ENST00000517740 490 ntBASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA6Q9Y5G7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.83■□□□□ 0.92
PCDHGA6Q9Y5G7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA6Q9Y5G7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA6Q9Y5G7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA6Q9Y5G7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHGA6Q9Y5G7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 AC092437.1-201ENST00000624794 1048 ntBASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA6Q9Y5G7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 KRT18P14-201ENST00000534205 1250 ntBASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA6Q9Y5G7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms