Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB11Q9Y5F2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 MIR572-201ENST00000384983 95 ntBASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB11Q9Y5F2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L2-201ENST00000561772 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L6-201ENST00000626483 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L1-201ENST00000627662 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L8-201ENST00000629013 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L3-201ENST00000630187 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L7-201ENST00000630678 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 DUX4L5-201ENST00000630834 1275 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 AL031602.1-201ENST00000633169 911 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 AC068587.7-201ENST00000641602 218 ntBASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB11Q9Y5F2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 AC012414.1-201ENST00000556676 535 ntBASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB11Q9Y5F2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 EP400NL-214ENST00000641289 2402 ntBASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 LINC01960-201ENST00000563759 1884 ntBASIC21.18■□□□□ 0.98
PCDHB11Q9Y5F2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 GUSBP5-202ENST00000510805 1989 ntBASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 MIR6084-201ENST00000622012 110 ntBASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHB11Q9Y5F2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB11Q9Y5F2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms