Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 TPRG1LP1-201ENST00000598702 760 ntBASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 SMUG1P1-201ENST00000590640 811 ntBASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 BX005040.4-201ENST00000637145 1518 ntBASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHB2Q9Y5E7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 AC092437.1-201ENST00000624794 1048 ntBASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 OXCT2P1-201ENST00000447263 1535 ntBASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB2Q9Y5E7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 AL137784.2-201ENST00000607332 1000 ntBASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB2Q9Y5E7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 C1orf229-201ENST00000623686 2258 ntBASIC23.76■■□□□ 1.39
PCDHB2Q9Y5E7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB2Q9Y5E7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB2Q9Y5E7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
PCDHB2Q9Y5E7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHB2Q9Y5E7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 KRT18P61-201ENST00000585825 1298 ntBASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 RARRES2P11-201ENST00000635158 484 ntBASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHB2Q9Y5E7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDHB2Q9Y5E7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.7■■□□□ 1.39
PCDHB2Q9Y5E7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms