Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 AL109923.1-201ENST00000618799 583 ntBASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 AP003733.4-201ENST00000623785 1697 ntBASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NOTCH3Q9UM47 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH3Q9UM47 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 AC073210.2-201ENST00000430369 194 ntBASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 AC087239.1-201ENST00000622671 572 ntBASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.61■□□□□ 0.25
NOTCH3Q9UM47 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 AC079630.1-202ENST00000618127 1840 ntBASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH3Q9UM47 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.59■□□□□ 0.25
NOTCH3Q9UM47 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms