Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 AC006455.2-201ENST00000429931 906 ntBASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 AC092171.4-201ENST00000609130 632 ntBASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL39Q9NYK5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL39Q9NYK5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MRPL39Q9NYK5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MRPL39Q9NYK5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 LINC01960-201ENST00000563759 1884 ntBASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 pRNA.6-201ENST00000610482 90 ntBASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 pRNA.5-201ENST00000612139 90 ntBASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 pRNA.11-201ENST00000618423 90 ntBASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 pRNA.13-201ENST00000619112 90 ntBASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL39Q9NYK5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 AC242852.2-201ENST00000615738 1807 ntBASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 ECEL1P1-201ENST00000373592 1742 ntBASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 AC133637.1-201ENST00000624115 1537 ntBASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL39Q9NYK5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 MIR4466-201ENST00000606121 54 ntBASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.74■□□□□ 0.75
MRPL39Q9NYK5 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 AC007375.3-201ENST00000600936 2314 ntBASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms