Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PARPBPQ9NWS1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 C9orf163-202ENST00000624034 2573 ntBASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 IRS3P-201ENST00000223076 1006 ntBASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.31■□□□□ 0.68
PARPBPQ9NWS1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 MIR572-201ENST00000384983 95 ntBASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PARPBPQ9NWS1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 AC079089.2-201ENST00000531211 1277 ntBASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PARPBPQ9NWS1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 AC087742.1-201ENST00000575880 1738 ntBASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 C1orf229-201ENST00000623686 2258 ntBASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PARPBPQ9NWS1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PARPBPQ9NWS1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PARPBPQ9NWS1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PARPBPQ9NWS1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PARPBPQ9NWS1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PARPBPQ9NWS1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms