Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.38■□□□□ 0.69
SEC61A2Q9H9S3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 AC080038.3-201ENST00000623346 1952 ntBASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 LINC00526-201ENST00000581067 1875 ntBASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 MIR4767-201ENST00000582827 78 ntBASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A2Q9H9S3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SEC61A2Q9H9S3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 AL031432.3-201ENST00000607698 485 ntBASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SEC61A2Q9H9S3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A2Q9H9S3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SEC61A2Q9H9S3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A2Q9H9S3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A2Q9H9S3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
SEC61A2Q9H9S3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.33■□□□□ 0.69
SEC61A2Q9H9S3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 AC005837.3-201ENST00000612163 286 ntBASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 AC011298.3-201ENST00000615796 283 ntBASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A2Q9H9S3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A2Q9H9S3 AL138724.1-201ENST00000606771 1088 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms