Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 DUX4L7-201ENST00000630678 1275 ntBASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4L5-201ENST00000630834 1275 ntBASIC18.2■□□□□ 0.5
TIMD4Q96H15 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
TIMD4Q96H15 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMD4Q96H15 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.19■□□□□ 0.5
TIMD4Q96H15 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.19■□□□□ 0.5
TIMD4Q96H15 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TIMD4Q96H15 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMD4Q96H15 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.18■□□□□ 0.5
TIMD4Q96H15 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMD4Q96H15 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMD4Q96H15 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMD4Q96H15 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMD4Q96H15 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.17■□□□□ 0.5
TIMD4Q96H15 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 KRT18P5-201ENST00000436075 1291 ntBASIC18.17■□□□□ 0.5
TIMD4Q96H15 AC079089.2-201ENST00000531211 1277 ntBASIC18.17■□□□□ 0.5
TIMD4Q96H15 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TIMD4Q96H15 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TIMD4Q96H15 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMD4Q96H15 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 NTF6G-201ENST00000591094 616 ntBASIC18.16■□□□□ 0.5
TIMD4Q96H15 TPRG1LP1-201ENST00000598702 760 ntBASIC18.16■□□□□ 0.5
TIMD4Q96H15 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMD4Q96H15 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMD4Q96H15 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 AC009237.3-201ENST00000393279 1427 ntBASIC18.15■□□□□ 0.5
TIMD4Q96H15 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMD4Q96H15 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TIMD4Q96H15 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.14■□□□□ 0.5
TIMD4Q96H15 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TIMD4Q96H15 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.14■□□□□ 0.5
TIMD4Q96H15 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.14■□□□□ 0.49
TIMD4Q96H15 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMD4Q96H15 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMD4Q96H15 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.14■□□□□ 0.49
TIMD4Q96H15 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms