Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 AC144652.1-201ENST00000609974 1624 ntBASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHMP6Q96FZ7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP6Q96FZ7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP6Q96FZ7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 AC004987.1-201ENST00000428627 508 ntBASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 ATP5G2P3-201ENST00000429083 425 ntBASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 AC011551.1-201ENST00000614101 683 ntBASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 AC007952.6-201ENST00000573168 2673 ntBASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 AC003957.1-201ENST00000625108 2673 ntBASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP6Q96FZ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 LONRF2P2-201ENST00000439212 571 ntBASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 LINC01006-201ENST00000333319 2292 ntBASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CHMP6Q96FZ7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 LINC01960-201ENST00000563759 1884 ntBASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP6Q96FZ7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.7■■□□□ 1.07
CHMP6Q96FZ7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP6Q96FZ7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 TSPY13P-201ENST00000338964 914 ntBASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.69■■□□□ 1.06
CHMP6Q96FZ7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms