Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 C11orf96-202ENST00000528572 1834 ntBASIC21.26■□□□□ 0.99
SPDL1Q96EA4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SPDL1Q96EA4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 BHLHE23-202ENST00000612929 1109 ntBASIC21.25■□□□□ 0.99
SPDL1Q96EA4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPDL1Q96EA4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 AC080038.3-201ENST00000623346 1952 ntBASIC21.24■□□□□ 0.99
SPDL1Q96EA4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDL1Q96EA4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.23■□□□□ 0.99
SPDL1Q96EA4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPDL1Q96EA4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDL1Q96EA4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDL1Q96EA4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDL1Q96EA4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDL1Q96EA4 PVT1_1.1-201ENST00000615125 194 ntBASIC21.21■□□□□ 0.99
SPDL1Q96EA4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPDL1Q96EA4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDL1Q96EA4 AC087742.1-201ENST00000575880 1738 ntBASIC21.21■□□□□ 0.99
SPDL1Q96EA4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 AC144652.1-201ENST00000609974 1624 ntBASIC21.2■□□□□ 0.98
SPDL1Q96EA4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 AC074183.2-201ENST00000623112 922 ntBASIC21.2■□□□□ 0.98
SPDL1Q96EA4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDL1Q96EA4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.19■□□□□ 0.98
SPDL1Q96EA4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SPDL1Q96EA4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPDL1Q96EA4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.19■□□□□ 0.98
SPDL1Q96EA4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.19■□□□□ 0.98
SPDL1Q96EA4 NTF6A-201ENST00000591175 560 ntBASIC21.19■□□□□ 0.98
SPDL1Q96EA4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPDL1Q96EA4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms