Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 LINC01960-201ENST00000563759 1884 ntBASIC19.48■□□□□ 0.71
SNX33Q8WV41 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SNX33Q8WV41 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SNX33Q8WV41 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX33Q8WV41 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX33Q8WV41 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX33Q8WV41 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX33Q8WV41 AC009086.3-201ENST00000623486 1008 ntBASIC19.46■□□□□ 0.71
SNX33Q8WV41 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX33Q8WV41 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX33Q8WV41 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX33Q8WV41 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX33Q8WV41 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX33Q8WV41 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX33Q8WV41 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX33Q8WV41 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX33Q8WV41 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX33Q8WV41 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX33Q8WV41 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX33Q8WV41 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX33Q8WV41 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX33Q8WV41 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX33Q8WV41 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX33Q8WV41 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX33Q8WV41 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX33Q8WV41 AC131281.2-201ENST00000520478 145 ntBASIC19.43■□□□□ 0.7
SNX33Q8WV41 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX33Q8WV41 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX33Q8WV41 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX33Q8WV41 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX33Q8WV41 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX33Q8WV41 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX33Q8WV41 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNX33Q8WV41 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX33Q8WV41 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX33Q8WV41 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX33Q8WV41 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms