Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01124-201ENST00000409786 2117 ntBASIC26.7■■□□□ 1.87
SNED1Q8TER0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
SNED1Q8TER0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SNED1Q8TER0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.7■■□□□ 1.86
SNED1Q8TER0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.7■■□□□ 1.86
SNED1Q8TER0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.7■■□□□ 1.86
SNED1Q8TER0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
SNED1Q8TER0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNED1Q8TER0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNED1Q8TER0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNED1Q8TER0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.7■■□□□ 1.86
SNED1Q8TER0 LINC00543-201ENST00000567234 1845 ntBASIC26.7■■□□□ 1.86
SNED1Q8TER0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SNED1Q8TER0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNED1Q8TER0 AC009237.3-201ENST00000393279 1427 ntBASIC26.69■■□□□ 1.86
SNED1Q8TER0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNED1Q8TER0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.69■■□□□ 1.86
SNED1Q8TER0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SNED1Q8TER0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNED1Q8TER0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SNED1Q8TER0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNED1Q8TER0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNED1Q8TER0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNED1Q8TER0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNED1Q8TER0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNED1Q8TER0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.68■■□□□ 1.86
SNED1Q8TER0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SNED1Q8TER0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SNED1Q8TER0 AC133552.2-202ENST00000575694 574 ntBASIC26.68■■□□□ 1.86
SNED1Q8TER0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.68■■□□□ 1.86
SNED1Q8TER0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNED1Q8TER0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNED1Q8TER0 AC055733.4-201ENST00000638462 1354 ntBASIC26.67■■□□□ 1.86
SNED1Q8TER0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
SNED1Q8TER0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.67■■□□□ 1.86
SNED1Q8TER0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.67■■□□□ 1.86
SNED1Q8TER0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
SNED1Q8TER0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNED1Q8TER0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNED1Q8TER0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SNED1Q8TER0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.67■■□□□ 1.86
SNED1Q8TER0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNED1Q8TER0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNED1Q8TER0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNED1Q8TER0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SNED1Q8TER0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNED1Q8TER0 SLC29A4P1-201ENST00000398760 971 ntBASIC26.65■■□□□ 1.86
SNED1Q8TER0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 AC008687.6-201ENST00000596318 630 ntBASIC26.65■■□□□ 1.86
SNED1Q8TER0 AP001160.3-201ENST00000601484 763 ntBASIC26.65■■□□□ 1.86
SNED1Q8TER0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNED1Q8TER0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNED1Q8TER0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.65■■□□□ 1.86
SNED1Q8TER0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNED1Q8TER0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNED1Q8TER0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNED1Q8TER0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNED1Q8TER0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SNED1Q8TER0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.64■■□□□ 1.85
SNED1Q8TER0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SNED1Q8TER0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SNED1Q8TER0 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.64■■□□□ 1.85
SNED1Q8TER0 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.64■■□□□ 1.85
SNED1Q8TER0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNED1Q8TER0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNED1Q8TER0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.63■■□□□ 1.85
SNED1Q8TER0 AC010141.2-201ENST00000452426 721 ntBASIC26.63■■□□□ 1.85
SNED1Q8TER0 AC004812.2-201ENST00000611079 2094 ntBASIC26.63■■□□□ 1.85
SNED1Q8TER0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNED1Q8TER0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNED1Q8TER0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SNED1Q8TER0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SNED1Q8TER0 AF201337.1-201ENST00000520239 748 ntBASIC26.62■■□□□ 1.85
SNED1Q8TER0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SNED1Q8TER0 DUSP8P5-201ENST00000422884 1815 ntBASIC26.62■■□□□ 1.85
SNED1Q8TER0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SNED1Q8TER0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNED1Q8TER0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNED1Q8TER0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.61■■□□□ 1.85
SNED1Q8TER0 AC093827.2-201ENST00000512654 315 ntBASIC26.61■■□□□ 1.85
SNED1Q8TER0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.61■■□□□ 1.85
SNED1Q8TER0 AC010536.3-201ENST00000620306 533 ntBASIC26.61■■□□□ 1.85
SNED1Q8TER0 AC133041.1-202ENST00000642053 222 ntBASIC26.61■■□□□ 1.85
SNED1Q8TER0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNED1Q8TER0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.61■■□□□ 1.85
SNED1Q8TER0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNED1Q8TER0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms