Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 LINC01529-204ENST00000636474 1715 ntBASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
ALMS1Q8TCU4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ALMS1Q8TCU4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ALMS1Q8TCU4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.83□□□□□ -0.03
ALMS1Q8TCU4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 MIR4758-201ENST00000577688 71 ntBASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 AC013268.1-206ENST00000638368 961 ntBASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 AC112229.1-201ENST00000639295 961 ntBASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ALMS1Q8TCU4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 FAM210CP-201ENST00000445714 574 ntBASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 AC010141.2-201ENST00000452426 721 ntBASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 ECEL1P3-201ENST00000427961 737 ntBASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 DUSP8P5-201ENST00000422884 1815 ntBASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.82□□□□□ -0.04
ALMS1Q8TCU4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 OXCT2P1-201ENST00000447263 1535 ntBASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 TERF1P5-201ENST00000477545 1207 ntBASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 AC008694.1-202ENST00000636953 945 ntBASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 AL158047.1-201ENST00000445918 881 ntBASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.81□□□□□ -0.04
ALMS1Q8TCU4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 AC135731.1-201ENST00000569415 2548 ntBASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ALMS1Q8TCU4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms