Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 PRAL-201ENST00000624952 3286 ntBASIC13.75□□□□□ -0.21
SVIPQ8NHG7 AC139713.2-201ENST00000641328 2723 ntBASIC13.75□□□□□ -0.21
SVIPQ8NHG7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SVIPQ8NHG7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 BX323043.1-201ENST00000641006 1765 ntBASIC13.73□□□□□ -0.21
SVIPQ8NHG7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.73□□□□□ -0.21
SVIPQ8NHG7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SVIPQ8NHG7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SVIPQ8NHG7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.71□□□□□ -0.21
SVIPQ8NHG7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SVIPQ8NHG7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SVIPQ8NHG7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.71□□□□□ -0.21
SVIPQ8NHG7 AC018445.3-201ENST00000624177 1945 ntBASIC13.71□□□□□ -0.21
SVIPQ8NHG7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SVIPQ8NHG7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SVIPQ8NHG7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SVIPQ8NHG7 CICP6-201ENST00000457191 2729 ntBASIC13.7□□□□□ -0.22
SVIPQ8NHG7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.7□□□□□ -0.22
SVIPQ8NHG7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms