Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 AL031602.1-201ENST00000633169 911 ntBASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF439Q8NDP4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF439Q8NDP4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
ZNF439Q8NDP4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 AC092053.2-201ENST00000640557 1818 ntBASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF439Q8NDP4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 OR2I1P-207ENST00000453522 948 ntBASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 AL138724.1-201ENST00000606771 1088 ntBASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZNF439Q8NDP4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 SERBP1P1-201ENST00000396021 1160 ntBASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 DUX4L19-201ENST00000557448 1267 ntBASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF439Q8NDP4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF439Q8NDP4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms