Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB43Q86YS6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB43Q86YS6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB43Q86YS6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 AC087239.1-201ENST00000622671 572 ntBASIC20.6■□□□□ 0.89
RAB43Q86YS6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB43Q86YS6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.6■□□□□ 0.89
RAB43Q86YS6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB43Q86YS6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB43Q86YS6 AC079630.1-202ENST00000618127 1840 ntBASIC20.6■□□□□ 0.89
RAB43Q86YS6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB43Q86YS6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAB43Q86YS6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB43Q86YS6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RAB43Q86YS6 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.59■□□□□ 0.89
RAB43Q86YS6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB43Q86YS6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB43Q86YS6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB43Q86YS6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RAB43Q86YS6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.58■□□□□ 0.89
RAB43Q86YS6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.58■□□□□ 0.89
RAB43Q86YS6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RAB43Q86YS6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB43Q86YS6 TERF1P2-201ENST00000583350 1212 ntBASIC20.58■□□□□ 0.89
RAB43Q86YS6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB43Q86YS6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB43Q86YS6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB43Q86YS6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB43Q86YS6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB43Q86YS6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB43Q86YS6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB43Q86YS6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB43Q86YS6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB43Q86YS6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 IKBKGP1-201ENST00000612193 1073 ntBASIC20.57■□□□□ 0.88
RAB43Q86YS6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB43Q86YS6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.57■□□□□ 0.88
RAB43Q86YS6 AC004687.1-201ENST00000579003 1625 ntBASIC20.56■□□□□ 0.88
RAB43Q86YS6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB43Q86YS6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 NTF6G-201ENST00000591094 616 ntBASIC20.56■□□□□ 0.88
RAB43Q86YS6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB43Q86YS6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB43Q86YS6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB43Q86YS6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB43Q86YS6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB43Q86YS6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB43Q86YS6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB43Q86YS6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RAB43Q86YS6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms