Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 UNC93B8-201ENST00000511903 705 ntBASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 C11orf96-202ENST00000528572 1834 ntBASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AC241377.3-202ENST00000626088 1088 ntBASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AC241585.3-202ENST00000628937 1088 ntBASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AC245100.8-202ENST00000629247 1058 ntBASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 AC137767.1-201ENST00000602918 1920 ntBASIC13.88□□□□□ -0.19
MRPL55Q7Z7F7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 BID-212ENST00000614949 1988 ntTSL 5 BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MRPL55Q7Z7F7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.86□□□□□ -0.19
MRPL55Q7Z7F7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms