Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS13CQ709C8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS13CQ709C8 DUSP5P2-201ENST00000426873 1033 ntBASIC18.28■□□□□ 0.52
VPS13CQ709C8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.28■□□□□ 0.52
VPS13CQ709C8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VPS13CQ709C8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS13CQ709C8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS13CQ709C8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS13CQ709C8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.27■□□□□ 0.51
VPS13CQ709C8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS13CQ709C8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS13CQ709C8 POU5F1P3-201ENST00000428824 1078 ntBASIC18.27■□□□□ 0.51
VPS13CQ709C8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.27■□□□□ 0.51
VPS13CQ709C8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS13CQ709C8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 AC087239.1-201ENST00000622671 572 ntBASIC18.26■□□□□ 0.51
VPS13CQ709C8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS13CQ709C8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.26■□□□□ 0.51
VPS13CQ709C8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS13CQ709C8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.25■□□□□ 0.51
VPS13CQ709C8 AC083880.1-201ENST00000608266 535 ntBASIC18.25■□□□□ 0.51
VPS13CQ709C8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS13CQ709C8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VPS13CQ709C8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.24■□□□□ 0.51
VPS13CQ709C8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS13CQ709C8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
VPS13CQ709C8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS13CQ709C8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VPS13CQ709C8 FP325331.1-202ENST00000623531 1380 ntBASIC18.23■□□□□ 0.51
VPS13CQ709C8 AC007322.1-201ENST00000426983 750 ntBASIC18.23■□□□□ 0.51
VPS13CQ709C8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
VPS13CQ709C8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
VPS13CQ709C8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS13CQ709C8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS13CQ709C8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS13CQ709C8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VPS13CQ709C8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
VPS13CQ709C8 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.23■□□□□ 0.51
VPS13CQ709C8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VPS13CQ709C8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS13CQ709C8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.22■□□□□ 0.51
VPS13CQ709C8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VPS13CQ709C8 AC105036.2-201ENST00000569468 176 ntBASIC18.22■□□□□ 0.51
VPS13CQ709C8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
VPS13CQ709C8 FAM201B-201ENST00000458407 597 ntBASIC18.22■□□□□ 0.51
VPS13CQ709C8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.22■□□□□ 0.51
VPS13CQ709C8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS13CQ709C8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VPS13CQ709C8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VPS13CQ709C8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS13CQ709C8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS13CQ709C8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS13CQ709C8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS13CQ709C8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VPS13CQ709C8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13CQ709C8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS13CQ709C8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13CQ709C8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13CQ709C8 KRT18P29-201ENST00000397031 1267 ntBASIC18.2■□□□□ 0.5
VPS13CQ709C8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13CQ709C8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS13CQ709C8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.2■□□□□ 0.5
VPS13CQ709C8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13CQ709C8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS13CQ709C8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS13CQ709C8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS13CQ709C8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS13CQ709C8 AC079140.4-201ENST00000507448 529 ntBASIC18.19■□□□□ 0.5
VPS13CQ709C8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS13CQ709C8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS13CQ709C8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms