Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 AL499627.2-201ENST00000606283 725 ntBASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 MIR6724-1-201ENST00000616420 92 ntBASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 MIR6724-2-201ENST00000616483 92 ntBASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 MIR6724-4-201ENST00000617390 92 ntBASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 MIR6724-3-201ENST00000622482 92 ntBASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMARCD3Q6STE5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 AC010542.4-201ENST00000563151 1910 ntBASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMARCD3Q6STE5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 AL451085.2-201ENST00000605085 799 ntBASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 AL117332.1-201ENST00000622628 974 ntBASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD3Q6STE5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCD3Q6STE5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 FAM99A-202ENST00000538190 1989 ntBASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 UNC93B8-201ENST00000511903 705 ntBASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 AC241377.3-202ENST00000626088 1088 ntBASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 AC241585.3-202ENST00000628937 1088 ntBASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 AC245100.8-202ENST00000629247 1058 ntBASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD3Q6STE5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD3Q6STE5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms